AIC.mixstock.est {mixstock} | R Documentation

## commands for mixed stock analysis estimates

### Description

calculate AIC, confidence intervals, etc., for mixed stock analysis estimates

### Usage

    ## S3 method for class 'mixstock.est':
    AIC(object, ...)
    ## S3 method for class 'mixstock.est':
    boxplot(x,...)
    ## S3 method for class 'mixstock.est':
    coef(object,...)
    ## S3 method for class 'mixstock.est':
    logLik(object,...)
    ## S3 method for class 'mixstock.est':
    confint(object,parm,level=0.95,profile=FALSE,type=c("quantile","credible"),
    show.sourcectr=TRUE,show.haps=FALSE,...)
    ## S3 method for class 'mixstock.est':
    summary(object,...)
    as.mixstock.est(object)

### Arguments

`object` | mixed stock analysis estimate
`x` | mixed stock analysis estimate
`parm` | parameter
`level` | confidence level
`profile` | confidence intervals by likelihood profiling? (stub)
`type` | for MCMC runs, produce credible intervals or quantiles of chains?
`show.sourcectr` | show confidence intervals for source-centric estimates?
`show.haps` | show confidence limits for marker frequencies?
`...` | additional arguments

### Value

Various summary statistics retrieved from mixed stock analysis estimates

### Note

AIC and logLik return statistical values etc. ... many of these are stubs

### Author(s)

Ben Bolker

[Package mixstock version 0.9.2 Index]