paleotree-package	paleotree-package
addTermBranchLength	modifyTerminalBranches
binTimeData	binTimeData
bin_cal3TimePaleoPhy	cal3TimePaleoPhy
bin_timePaleoPhy	timePaleoPhy
branchClasses	branchClasses
cal3TimePaleoPhy	cal3TimePaleoPhy
candleTaxa	termTaxa
cladogeneticTraitCont	cladogeneticTraitCont
collapseNodes	degradeTree
compareNodeAges	compareTimescaling
compareTermBranches	compareTimescaling
compareTimescaling	compareTimescaling
constrainParPaleo	constrainParPaleo
dateNodes	dateNodes
deadTree	termTaxa
degradeTree	degradeTree
depthRainbow	depthRainbow
DiversityCurves	DiversityCurves
dropExtant	modifyTerminalBranches
dropExtinct	modifyTerminalBranches
dropPaleoTip	modifyTerminalBranches
dropZLB	modifyTerminalBranches
durationFreq	durationFreq
expandTaxonTree	expandTaxonTree
fixRootTime	modifyTerminalBranches
footeValues	footeValues
freqRat	freqRat
getSampProbDisc	getSampProbDisc
getSampRateCont	getSampRateCont
graptCharMatrix	graptDisparity
graptDisparity	graptDisparity
graptDistMat	graptDisparity
graptRanges	graptDisparity
horizonSampRate	horizonSampRate
inverseSurv	inverseSurv
invSurv	inverseSurv
make_durationFreqCont	durationFreq
make_durationFreqDisc	durationFreq
make_inverseSurv	inverseSurv
minBranchLength	minBranchLength
modelMethods	modelMethods
modifyTerminalBranches	modifyTerminalBranches
multiDiv	multiDiv
nearestNeighborDist	nearestNeighborDist
optimPaleo	optimPaleo
paleotree	paleotree-package
parbounds	modelMethods
parbounds.constrained	modelMethods
parbounds.paleotreeFunc	modelMethods
parbounds<-	modelMethods
parbounds<-.constrained	modelMethods
parbounds<-.paleotreeFunc	modelMethods
parInit	modelMethods
parInit.constrained	modelMethods
parInit.paleotreeFunc	modelMethods
parLower	modelMethods
parLower.constrained	modelMethods
parLower.paleotreeFunc	modelMethods
parLower<-	modelMethods
parLower<-.constrained	modelMethods
parLower<-.paleotreeFunc	modelMethods
parnames	modelMethods
parnames.constrained	modelMethods
parnames.paleotreeFunc	modelMethods
parnames<-	modelMethods
parnames<-.constrained	modelMethods
parnames<-.paleotreeFunc	modelMethods
parUpper	modelMethods
parUpper.constrained	modelMethods
parUpper.paleotreeFunc	modelMethods
parUpper<-	modelMethods
parUpper<-.constrained	modelMethods
parUpper<-.paleotreeFunc	modelMethods
perCapitaRates	perCapitaRates
perfectParsCharTree	perfectParsCharTree
phyloDiv	DiversityCurves
plotMultiDiv	multiDiv
plotTraitgram	plotTraitgram
pqr2Ps	pqr2Ps
pqsRate2sProb	SamplingConv
probAnc	probAnc
qsProb2Comp	SamplingConv
qsRate2Comp	SamplingConv
retiolitinae	retiolitinae
retioRanges	retiolitinae
retioTree	retiolitinae
reverseList	reverseList
rootSplit	rootSplit
sampleRanges	sampleRanges
SamplingConv	SamplingConv
seqTimeList	seqTimeList
simCandleTaxa	termTaxa
simFossilTaxa	simFossilTaxa
simFossilTaxa_SRCond	simFossilTaxa_SRCond
simPaleoTrees	simPaleoTrees
simTermTaxa	termTaxa
simTermTaxaAdvanced	termTaxa
sProb2sRate	SamplingConv
sRate2sProb	SamplingConv
taxa2cladogram	taxa2cladogram
taxa2phylo	taxa2phylo
taxicDivCont	DiversityCurves
taxicDivDisc	DiversityCurves
termTaxa	termTaxa
timeLadderTree	timeLadderTree
timePaleoPhy	timePaleoPhy
timeSliceTree	timeSliceTree
trueCandle	termTaxa
trueTermTaxaTree	termTaxa
unitLengthTree	unitLengthTree
