cape-package	cape-package
calc.delta.errors	calc.delta.errors
calc.p	calc.p
cape	cape-package
consec.pairs	consec.pairs
create.covar	create.covar
delete.pheno	delete.pheno
direct.influence	direct.influence
error.prop	error.prop
genome.wide.threshold.1D	genome.wide.threshold.1D
get.col.num	get.col.num
get.covar	get.covar
get.eigentraits	get.eigentraits
get.layout.mat	get.layout.mat
get.linearly.independent	get.linearly.independent
get.network	get.network
get.pairs.for.pairscan	get.pairs.for.pairscan
linkage.blocks.stepwise	linkage.blocks.stepwise
myImagePlot	myImagePlot
norm.pheno	norm.pheno
obesity.cross	obesity.cross
one.pairscan	one.pairscan
one.singlescan	one.singlescan
pair.matrix	pair.matrix
pairscan	pairscan
pairscan.null	pairscan.null
plotCollapsedVarInf	plotCollapsedVarInf
plotNetwork	plotNetwork
plotPairscan	plotPairscan
plotSinglescan	plotSinglescan
plotSinglescan.heat	plotSinglescan.heat
plotSVD	plotSVD
plotVariantInfluences	plotVariantInfluences
read.population	read.population
remove.ind.with.missing.pheno	remove.ind.with.missing.pheno
report.progress	report.progress
rotate.mat	rotate.mat
rz.transform	rz.transform
segment.region	segment.region
select.by.chr	select.by.chr
select.by.ind	select.by.ind
select.eigentraits	select.eigentraits
select.markers.for.pairscan	select.markers.for.pairscan
select.pheno	select.pheno
set.covar	set.covar
set.pairscan.thresh	set.pairscan.thresh
singlescan	singlescan
writePopulation	writePopulation
writeVariantInfluences	writeVariantInfluences
