* using log directory 'd:/Rcompile/CRANpkg/local/3.2/SVMMaj.Rcheck' * using R version 3.2.5 (2016-04-14) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'SVMMaj/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'SVMMaj' version '0.2-2' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'SVMMaj' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... NOTE Namespaces in Imports field not imported from: 'MASS' 'graphics' 'methods' 'stats' All declared Imports should be used. Package in Depends field not imported from: 'kernlab' These packages need to be imported from (in the NAMESPACE file) for when this namespace is loaded but not attached. * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE roccurve: warning in formatC(sum(c1 * cumsum(c2)), digit = 4): partial argument match of 'digit' to 'digits' svmmajtuning: warning in .svmmaj(Z[groups != i, ], y[groups != i], lambda = lambda[l], w = w[groups != i], increase.step = increase.step, hinge = newHinge, theta = theta, check.positive = FALSE, convergence = convergence, ...): partial argument match of 'hinge' to 'hingef' auc: no visible global function definition for 'error' getUpdate: no visible global function definition for 'vanilladot' getUpdate: no visible global function definition for 'kernelMatrix' qhat.theta: no visible global function definition for 'kernelMatrix' roccurve: no visible global function definition for 'error' svmmaj.default: no visible binding for global variable 'vanilladot' svmmaj.default: no visible global function definition for 'kpar' svmmaj2.default: no visible binding for global variable 'vanilladot' svmmaj2.default: no visible global function definition for 'kpar' svmmajtuning: no visible binding for global variable 'vanilladot' * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... [7s] OK * checking PDF version of manual ... OK * DONE Status: 2 NOTEs