* using log directory 'd:/Rcompile/CRANpkg/local/3.2/hzar.Rcheck' * using R version 3.2.5 (2016-04-14) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'hzar/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'hzar' version '0.2-5' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'hzar' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... NOTE Packages in Depends field not imported from: 'MCMCpack' 'coda' 'foreach' These packages need to be imported from (in the NAMESPACE file) for when this namespace is loaded but not attached. * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE fitter.gen.rParam.uniform: no visible global function definition for '%do%' fitter.gen.rParam.uniform: no visible global function definition for 'foreach' hzar.chain.doSeq: no visible global function definition for 'mcmc' hzar.chain.doSeq: no visible global function definition for 'thin' hzar.dataGroup.null: no visible global function definition for 'mcmc' hzar.doChain.multi: no visible global function definition for '%dopar%' hzar.doChain.multi: no visible global function definition for 'foreach' hzar.doChain.multi: no visible global function definition for '%do%' hzar.doFit: no visible global function definition for 'MCMCmetrop1R' hzar.doFit.multi: no visible global function definition for '%dopar%' hzar.doFit.multi: no visible global function definition for 'foreach' hzar.doFit.multi: no visible global function definition for '%do%' hzar.eval.clineLL: no visible global function definition for '%dopar%' hzar.eval.clineLL: no visible global function definition for 'foreach' hzar.eval.clineLL: no visible global function definition for '%do%' hzar.fit2DataGroup: no visible global function definition for 'mcmc' hzar.mcmc.bindLL: no visible global function definition for 'mcmc' hzar.mcmc.bindLL: no visible global function definition for 'as.mcmc' hzar.mcmc.bindLL: no visible global function definition for 'thin' hzar.profile.dataGroup: no visible global function definition for 'equal.count' hzar.profile.dataGroup: no visible global function definition for 'foreach' hzar.profile.dataGroup: no visible global function definition for '%dopar%' hzar.profile.dataGroup: no visible global function definition for '%do%' optimizeTrace: no visible global function definition for 'as.mcmc' * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... [61s] OK * checking PDF version of manual ... OK * DONE Status: 2 NOTEs