* using log directory 'd:/Rcompile/CRANpkg/local/3.2/mcPAFit.Rcheck'
* using R version 3.2.5 (2016-04-14)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* checking for file 'mcPAFit/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'mcPAFit' version '0.1.3'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'mcPAFit' can be installed ... ERROR
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.2/mcPAFit.Rcheck/00install.out' for details.
* DONE
The installation logfile:
* installing *source* package 'mcPAFit' ...
** package 'mcPAFit' successfully unpacked and MD5 sums checked
** libs

*** arch - i386
make[1]: Entering directory `/cygdrive/d/temp/Rtmpi8XWgW/R.INSTALL313b432c028ab/mcPAFit/src-i386'
g++  -std=c++0x -I"D:/RCompile/recent/R-3.2.5/include" -DNDEBUG    -I"d:/RCompile/CRANpkg/lib/3.2/Rcpp/include" -I"d:/RCompile/r-compiling/local/local323/include"  -fopenmp   -O2 -Wall  -mtune=core2 -c Cpp_code.cpp -o Cpp_code.o
Cpp_code.cpp: In function 'int mcmc_running(std::vector<std::basic_string<char> >)':
Cpp_code.cpp:263:46: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
Cpp_code.cpp:321:44: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
g++  -std=c++0x -I"D:/RCompile/recent/R-3.2.5/include" -DNDEBUG    -I"d:/RCompile/CRANpkg/lib/3.2/Rcpp/include" -I"d:/RCompile/r-compiling/local/local323/include"  -fopenmp   -O2 -Wall  -mtune=core2 -c RcppExports.cpp -o RcppExports.o
g++ -shared -s -static-libgcc -o mcPAFit.dll tmp.def Cpp_code.o RcppExports.o -fopenmp -Ld:/RCompile/r-compiling/local/local323/lib/i386 -Ld:/RCompile/r-compiling/local/local323/lib -LD:/RCompile/recent/R-3.2.5/bin/i386 -lR
make[1]: Leaving directory `/cygdrive/d/temp/Rtmpi8XWgW/R.INSTALL313b432c028ab/mcPAFit/src-i386'
make[1]: Entering directory `/cygdrive/d/temp/Rtmpi8XWgW/R.INSTALL313b432c028ab/mcPAFit/src-i386'
make[1]: Leaving directory `/cygdrive/d/temp/Rtmpi8XWgW/R.INSTALL313b432c028ab/mcPAFit/src-i386'
installing to d:/Rcompile/CRANpkg/lib/3.2/mcPAFit/libs/i386

*** arch - x64
make[1]: Entering directory `/cygdrive/d/temp/Rtmpi8XWgW/R.INSTALL313b432c028ab/mcPAFit/src-x64'
g++ -m64 -std=c++0x -I"D:/RCompile/recent/R-3.2.5/include" -DNDEBUG    -I"d:/RCompile/CRANpkg/lib/3.2/Rcpp/include" -I"d:/RCompile/r-compiling/local/local323/include"  -fopenmp   -O2 -Wall  -mtune=core2 -c Cpp_code.cpp -o Cpp_code.o
Cpp_code.cpp: In function 'int mcmc_running(std::vector<std::basic_string<char> >)':
Cpp_code.cpp:135:3: error: narrowing conversion of '(E->std::vector<_Tp, _Alloc>::size [with _Tp = edge, _Alloc = std::allocator<edge>, std::vector<_Tp, _Alloc>::size_type = long long unsigned int]() + -1u)' from 'std::vector<edge>::size_type {aka long long unsigned int}' to 'long unsigned int' inside { } [-fpermissive]
Cpp_code.cpp:263:46: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
Cpp_code.cpp:321:44: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
make[1]: *** [Cpp_code.o] Error 1
make[1]: Leaving directory `/cygdrive/d/temp/Rtmpi8XWgW/R.INSTALL313b432c028ab/mcPAFit/src-x64'
Warning: running command 'make -f "Makevars.win" -f "D:/RCompile/recent/R-3.2.5/etc/x64/Makeconf" -f "D:/RCompile/recent/R-3.2.5/etc/x64/Makevars.site" -f "D:/RCompile/recent/R-3.2.5/share/make/winshlib.mk" CXX='$(CXX1X) $(CXX1XSTD)' CXXFLAGS='$(CXX1XFLAGS)' CXXPICFLAGS='$(CXX1XPICFLAGS)' SHLIB_LDFLAGS='$(SHLIB_CXX1XLDFLAGS)' SHLIB_LD='$(SHLIB_CXX1XLD)' SHLIB="mcPAFit.dll" WIN=64 TCLBIN=64 OBJECTS="Cpp_code.o RcppExports.o"' had status 2
make[1]: Entering directory `/cygdrive/d/temp/Rtmpi8XWgW/R.INSTALL313b432c028ab/mcPAFit/src-x64'
g++ -m64 -std=c++0x -I"D:/RCompile/recent/R-3.2.5/include" -DNDEBUG    -I"d:/RCompile/CRANpkg/lib/3.2/Rcpp/include" -I"d:/RCompile/r-compiling/local/local323/include"  -fopenmp   -O2 -Wall  -mtune=core2 -c Cpp_code.cpp -o Cpp_code.o
Cpp_code.cpp: In function 'int mcmc_running(std::vector<std::basic_string<char> >)':
Cpp_code.cpp:135:3: error: narrowing conversion of '(E->std::vector<_Tp, _Alloc>::size [with _Tp = edge, _Alloc = std::allocator<edge>, std::vector<_Tp, _Alloc>::size_type = long long unsigned int]() + -1u)' from 'std::vector<edge>::size_type {aka long long unsigned int}' to 'long unsigned int' inside { } [-fpermissive]
Cpp_code.cpp:263:46: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
Cpp_code.cpp:321:44: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
make[1]: *** [Cpp_code.o] Error 1
make[1]: Leaving directory `/cygdrive/d/temp/Rtmpi8XWgW/R.INSTALL313b432c028ab/mcPAFit/src-x64'
Warning: running command 'make -f "Makevars.win" -f "D:/RCompile/recent/R-3.2.5/etc/x64/Makeconf" -f "D:/RCompile/recent/R-3.2.5/etc/x64/Makevars.site" -f "D:/RCompile/recent/R-3.2.5/share/make/winshlib.mk" CXX='$(CXX1X) $(CXX1XSTD)' CXXFLAGS='$(CXX1XFLAGS)' CXXPICFLAGS='$(CXX1XPICFLAGS)' SHLIB_LDFLAGS='$(SHLIB_CXX1XLDFLAGS)' SHLIB_LD='$(SHLIB_CXX1XLD)' SHLIB="mcPAFit.dll" WIN=64 TCLBIN=64 OBJECTS="Cpp_code.o RcppExports.o" symbols.rds' had status 2
ERROR: compilation failed for package 'mcPAFit'
* removing 'd:/Rcompile/CRANpkg/lib/3.2/mcPAFit'