* using log directory 'd:/Rcompile/CRANpkg/local/3.2/nlsr.Rcheck' * using R version 3.2.5 (2016-04-14) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'nlsr/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'nlsr' version '2017.2.19' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'nlsr' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking sizes of PDF files under 'inst/doc' ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [1s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [5s] OK Running 'bndmask.R' [0s] Running 'boundnlxb.R' [1s] Running 'derivs.R' [1s] Comparing 'derivs.Rout' to 'derivs.Rout.save' ... OK Running 'derivsJN.R' [1s] Running 'globaldata1.R' [0s] Running 'masksnlsr.R' [0s] Running 'oneparam.R' [0s] Running 'quadmin2.R' [1s] Running 'scaledxtests.R' [1s] * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking running R code from vignettes ... [2s] OK * checking re-building of vignette outputs ... NOTE Error in re-building vignettes: ... Error in deriv.default(firstd, "x") : invalid expression in 'FindSubexprs' Error : object 'x' not found Error : object 'x' not found Loading required package: Ryacas d:\RCompile\CRANpkg\lib\3.2\Ryacas\yacdir\yacas.exe and/or d:\RCompile\CRANpkg\lib\3.2\Ryacas\yacdir\scripts.dat not found run yacasInstall() without arguments to installation yacas. Attaching package: 'Ryacas' The following object is masked from 'package:Deriv': Simplify Quitting from lines 428-442 (nlsr-derivs.Rmd) Error: processing vignette 'nlsr-derivs.Rmd' failed with diagnostics: cannot open the connection Execution halted * checking PDF version of manual ... OK * DONE Status: 1 NOTE