* using log directory 'd:/Rcompile/CRANpkg/local/3.2/pbdSLAP.Rcheck' * using R version 3.2.5 (2016-04-14) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'pbdSLAP/DESCRIPTION' ... OK * this is package 'pbdSLAP' version '0.2-2' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'pbdSLAP' can be installed ... ERROR Installation failed. See 'd:/Rcompile/CRANpkg/local/3.2/pbdSLAP.Rcheck/00install.out' for details. * DONE The installation logfile: * installing *source* package 'pbdSLAP' ... ** package 'pbdSLAP' successfully unpacked and MD5 sums checked ** libs *** arch - i386 make[1]: Entering directory `/cygdrive/d/temp/RtmpCU5Hqm/R.INSTALL245c724e5800/pbdSLAP/src-i386' echo 'MPI_ROOT = C:/Program Files/Microsoft MPI/' > Makeconf echo 'MPI_INCLUDE = C:/Program Files/Microsoft MPI/Inc/' >> Makeconf echo 'MPI_LIB = C:/Program Files/Microsoft MPI/Lib/i386/msmpi.lib' >> Makeconf echo 'MY_CC = gcc ' >> Makeconf echo 'MY_FC = gfortran ' >> Makeconf echo 'PKG_CPPFLAGS = -I"C:/Program Files/Microsoft MPI/Inc/"' >> Makeconf echo 'PKG_CFLAGS = ' >> Makeconf echo 'PKG_FFLAGS = ' >> Makeconf echo 'PKG_LIBS = -L"D:/RCompile/recent/R-3.2.5/bin/i386" -lRlapack -L"D:/RCompile/recent/R-3.2.5/bin/i386" -lRblas -lgfortran "C:/Program Files/Microsoft MPI/Lib/i386/msmpi.lib"' >> Makeconf echo 'R_SLAP = lib/i386/libslap.a' >> Makeconf echo '### Added by Makevars' > SLmake.inc echo 'MPI_ROOT = C:/Program Files/Microsoft MPI/' >> SLmake.inc echo 'MPI_INCLUDE = C:/Program Files/Microsoft MPI/Inc/' >> SLmake.inc echo 'MY_CC = gcc ' >> SLmake.inc echo 'MY_FC = gfortran ' >> SLmake.inc echo 'R_SLAP = libslap.a' >> SLmake.inc echo 'include D:/RCompile/recent/R-3.2.5/etc/i386/Makeconf' >> SLmake.inc ( cd LAPACK; make ) make[2]: Entering directory `/cygdrive/d/temp/RtmpCU5Hqm/R.INSTALL245c724e5800/pbdSLAP/src-i386/LAPACK' gfortran -o dlarra.fo -c -I"D:/RCompile/recent/R-3.2.5/include" -DNDEBUG -I"C:/Program Files/Microsoft MPI/Inc/" -I"d:/RCompile/r-compiling/local/local323/include" -O3 -mtune=core2 -O3 dlarra.f gfortran -o dlarrc.fo -c -I"D:/RCompile/recent/R-3.2.5/include" -DNDEBUG -I"C:/Program Files/Microsoft MPI/Inc/" -I"d:/RCompile/r-compiling/local/local323/include" -O3 -mtune=core2 -O3 dlarrc.f gfortran -o dlarrd.fo -c -I"D:/RCompile/recent/R-3.2.5/include" -DNDEBUG -I"C:/Program Files/Microsoft MPI/Inc/" -I"d:/RCompile/r-compiling/local/local323/include" -O3 -mtune=core2 -O3 dlarrd.f gfortran -o dlarrk.fo -c -I"D:/RCompile/recent/R-3.2.5/include" -DNDEBUG -I"C:/Program Files/Microsoft MPI/Inc/" -I"d:/RCompile/r-compiling/local/local323/include" -O3 -mtune=core2 -O3 dlarrk.f ar cr ../libslap.a \ dlarra.fo dlarrc.fo dlarrd.fo dlarrk.fo ranlib ../libslap.a make[2]: Leaving directory `/cygdrive/d/temp/RtmpCU5Hqm/R.INSTALL245c724e5800/pbdSLAP/src-i386/LAPACK' ( cd BLACS; make ) make[2]: Entering directory `/cygdrive/d/temp/RtmpCU5Hqm/R.INSTALL245c724e5800/pbdSLAP/src-i386/BLACS' gcc -o BI_HypBS.fo -c -DAdd_ -I"D:/RCompile/recent/R-3.2.5/include" -DNDEBUG -I"C:/Program Files/Microsoft MPI/Inc/" -I"d:/RCompile/r-compiling/local/local323/include" -O3 -Wall -std=gnu99 -mtune=core2 -O3 BI_HypBS.c In file included from Bdef.h:12:0, from BI_HypBS.c:1: Bconfig.h:16:17: fatal error: mpi.h: No such file or directory compilation terminated. make[2]: *** [BI_HypBS.fo] Error 1 make[2]: Leaving directory `/cygdrive/d/temp/RtmpCU5Hqm/R.INSTALL245c724e5800/pbdSLAP/src-i386/BLACS' make[1]: *** [libslap.a] Error 2 make[1]: Leaving directory `/cygdrive/d/temp/RtmpCU5Hqm/R.INSTALL245c724e5800/pbdSLAP/src-i386' Warning: running command 'make -f "Makevars.win" -f "D:/RCompile/recent/R-3.2.5/etc/i386/Makeconf" -f "D:/RCompile/recent/R-3.2.5/etc/i386/Makevars.site" -f "D:/RCompile/recent/R-3.2.5/share/make/winshlib.mk" SHLIB="pbdSLAP.dll" SHLIB_LIBADD='$(FLIBS)' ' had status 2 make[1]: Entering directory `/cygdrive/d/temp/RtmpCU5Hqm/R.INSTALL245c724e5800/pbdSLAP/src-i386' echo '### Added by Makevars' > SLmake.inc echo 'MPI_ROOT = C:/Program Files/Microsoft MPI/' >> SLmake.inc echo 'MPI_INCLUDE = C:/Program Files/Microsoft MPI/Inc/' >> SLmake.inc echo 'MY_CC = gcc ' >> SLmake.inc echo 'MY_FC = gfortran ' >> SLmake.inc echo 'R_SLAP = libslap.a' >> SLmake.inc echo 'include D:/RCompile/recent/R-3.2.5/etc/i386/Makeconf' >> SLmake.inc ( cd LAPACK; make ) make[2]: Entering directory `/cygdrive/d/temp/RtmpCU5Hqm/R.INSTALL245c724e5800/pbdSLAP/src-i386/LAPACK' ar cr ../libslap.a \ dlarra.fo dlarrc.fo dlarrd.fo dlarrk.fo ranlib ../libslap.a make[2]: Leaving directory `/cygdrive/d/temp/RtmpCU5Hqm/R.INSTALL245c724e5800/pbdSLAP/src-i386/LAPACK' ( cd BLACS; make ) make[2]: Entering directory `/cygdrive/d/temp/RtmpCU5Hqm/R.INSTALL245c724e5800/pbdSLAP/src-i386/BLACS' gcc -o BI_HypBS.fo -c -DAdd_ -I"D:/RCompile/recent/R-3.2.5/include" -DNDEBUG -I"C:/Program Files/Microsoft MPI/Inc/" -I"d:/RCompile/r-compiling/local/local323/include" -O3 -Wall -std=gnu99 -mtune=core2 -O3 BI_HypBS.c In file included from Bdef.h:12:0, from BI_HypBS.c:1: Bconfig.h:16:17: fatal error: mpi.h: No such file or directory compilation terminated. make[2]: *** [BI_HypBS.fo] Error 1 make[2]: Leaving directory `/cygdrive/d/temp/RtmpCU5Hqm/R.INSTALL245c724e5800/pbdSLAP/src-i386/BLACS' make[1]: *** [libslap.a] Error 2 make[1]: Leaving directory `/cygdrive/d/temp/RtmpCU5Hqm/R.INSTALL245c724e5800/pbdSLAP/src-i386' Warning: running command 'make -f "Makevars.win" -f "D:/RCompile/recent/R-3.2.5/etc/i386/Makeconf" -f "D:/RCompile/recent/R-3.2.5/etc/i386/Makevars.site" -f "D:/RCompile/recent/R-3.2.5/share/make/winshlib.mk" SHLIB="pbdSLAP.dll" SHLIB_LIBADD='$(FLIBS)' symbols.rds' had status 2 ERROR: compilation failed for package 'pbdSLAP' * removing 'd:/Rcompile/CRANpkg/lib/3.2/pbdSLAP' * restoring previous 'd:/Rcompile/CRANpkg/lib/3.2/pbdSLAP'