* using log directory 'd:/Rcompile/CRANpkg/local/3.2/thregI.Rcheck'
* using R version 3.2.5 (2016-04-14)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* checking for file 'thregI/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'thregI' version '1.0.2'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'thregI' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... ERROR
Running examples in 'thregI-Ex.R' failed
The error most likely occurred in:

> ### Name: hr.thregI
> ### Title: perform hazard ratio for threshold regression model
> ### Aliases: hr hr.thregI
> ### Keywords: hazard ratio interval-censored data survival analysis
> ###   threshold regression
> 
> ### ** Examples
> 
> #load the data "bcos"
> data("bcos", package="thregI")
> 
> #transform the "treatment" variable into factor variable f.treatment
> bcos$f.treatment=factor(bcos$treatment)
> 
> #fit the threshold regression model on the factor variable f.treatment
> fit<-thregI(Surv(left, right, type='interval2')~f.treatment|f.treatment,data=bcos)
Warning in log(su(para) + Fv(para) - 0.9999999) : NaNs produced
Warning in log(su(para) + Fv(para) - 0.9999999) : NaNs produced
Warning in nlm(logf, p, hessian = TRUE) :
  NA/Inf replaced by maximum positive value
Warning in log(su(para) + Fv(para) - 0.9999999) : NaNs produced
Warning in nlm(logf, p, hessian = TRUE) :
  NA/Inf replaced by maximum positive value
Warning in log(su(para) + Fv(para) - 0.9999999) : NaNs produced
Warning in nlm(logf, p, hessian = TRUE) :
  NA/Inf replaced by maximum positive value
Warning in log(su(para) + Fv(para) - 0.9999999) : NaNs produced
Warning in nlm(logf, p, hessian = TRUE) :
  NA/Inf replaced by maximum positive value
Warning in log(su(para) + Fv(para) - 0.9999999) : NaNs produced
Warning in nlm(logf, p, hessian = TRUE) :
  NA/Inf replaced by maximum positive value
Warning in log(su(para) + Fv(para) - 0.9999999) : NaNs produced
Warning in nlm(logf, p, hessian = TRUE) :
  NA/Inf replaced by maximum positive value
Warning in log(su(para) + Fv(para) - 0.9999999) : NaNs produced
Warning in nlm(logf, p, hessian = TRUE) :
  NA/Inf replaced by maximum positive value
Warning in log(su(para) + Fv(para) - 0.9999999) : NaNs produced
Warning in nlm(logf, p, hessian = TRUE) :
  NA/Inf replaced by maximum positive value
Warning in log(su(para) + Fv(para) - 0.9999999) : NaNs produced
Warning in nlm(logf, p, hessian = TRUE) :
  NA/Inf replaced by maximum positive value
Warning in log(su(para) + Fv(para) - 0.9999999) : NaNs produced
Warning in nlm(logf, p, hessian = TRUE) :
  NA/Inf replaced by maximum positive value
Warning in log(su(para) + Fv(para) - 0.9999999) : NaNs produced
Warning in nlm(logf, p, hessian = TRUE) :
  NA/Inf replaced by maximum positive value
Warning in log(su(para) + Fv(para) - 0.9999999) : NaNs produced
Warning in nlm(logf, p, hessian = TRUE) :
  NA/Inf replaced by maximum positive value
Warning in log(su(para) + Fv(para) - 0.9999999) : NaNs produced
Warning in nlm(logf, p, hessian = TRUE) :
  NA/Inf replaced by maximum positive value
Warning in log(su(para) + Fv(para) - 0.9999999) : NaNs produced
Warning in nlm(logf, p, hessian = TRUE) :
  NA/Inf replaced by maximum positive value
Warning in log(su(para) + Fv(para) - 0.9999999) : NaNs produced
Warning in nlm(logf, p, hessian = TRUE) :
  NA/Inf replaced by maximum positive value
Warning in log(su(para) + Fv(para) - 0.9999999) : NaNs produced
Warning in nlm(logf, p, hessian = TRUE) :
  NA/Inf replaced by maximum positive value
Warning in log(su(para) + Fv(para) - 0.9999999) : NaNs produced
Warning in nlm(logf, p, hessian = TRUE) :
  NA/Inf replaced by maximum positive value
Warning in log(su(para) + Fv(para) - 0.9999999) : NaNs produced
Warning in nlm(logf, p, hessian = TRUE) :
  NA/Inf replaced by maximum positive value
Warning in log(su(para) + Fv(para) - 0.9999999) : NaNs produced
Warning in nlm(logf, p, hessian = TRUE) :
  NA/Inf replaced by maximum positive value
Error in solve.default(est$hessian) : 
  Lapack routine dgesv: system is exactly singular: U[1,1] = 0
Calls: thregI -> solve -> solve.default
Execution halted
* checking PDF version of manual ... OK
* DONE
Status: 1 ERROR