* using log directory 'd:/Rcompile/CRANpkg/local/3.2/valr.Rcheck' * using R version 3.2.5 (2016-04-14) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'valr/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'valr' version '0.1.2' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'valr' can be installed ... ERROR Installation failed. See 'd:/Rcompile/CRANpkg/local/3.2/valr.Rcheck/00install.out' for details. * DONE The installation logfile: * installing *source* package 'valr' ... ** package 'valr' successfully unpacked and MD5 sums checked ** libs *** arch - i386 make[1]: Entering directory `/cygdrive/d/temp/Rtmp6pdKRq/R.INSTALL2038202f64fb/valr/src-i386' g++ -std=c++0x -I"D:/RCompile/recent/R-3.2.5/include" -DNDEBUG -I../inst/include -I"d:/RCompile/CRANpkg/lib/3.2/Rcpp/include" -I"d:/RCompile/CRANpkg/lib/3.2/BH/include" -I"d:/RCompile/CRANpkg/lib/3.2/dplyr/include" -I"d:/RCompile/r-compiling/local/local323/include" -O2 -Wall -mtune=core2 -c RcppExports.cpp -o RcppExports.o In file included from RcppExports.cpp:4:0: ../inst/include/valr.h:22:9: error: 'unordered_map' in namespace 'std' does not name a type ../inst/include/valr.h:23:8: error: 'genome_map_t' does not name a type make[1]: *** [RcppExports.o] Error 1 make[1]: Leaving directory `/cygdrive/d/temp/Rtmp6pdKRq/R.INSTALL2038202f64fb/valr/src-i386' Warning: running command 'make -f "Makevars.win" -f "D:/RCompile/recent/R-3.2.5/etc/i386/Makeconf" -f "D:/RCompile/recent/R-3.2.5/etc/i386/Makevars.site" -f "D:/RCompile/recent/R-3.2.5/share/make/winshlib.mk" CXX='$(CXX1X) $(CXX1XSTD)' CXXFLAGS='$(CXX1XFLAGS)' CXXPICFLAGS='$(CXX1XPICFLAGS)' SHLIB_LDFLAGS='$(SHLIB_CXX1XLDFLAGS)' SHLIB_LD='$(SHLIB_CXX1XLD)' SHLIB="valr.dll" OBJECTS="RcppExports.o absdist.o closest.o complement.o coverage.o init.o intersect.o merge.o random.o reldist.o shuffle.o subtract.o utils.o"' had status 2 make[1]: Entering directory `/cygdrive/d/temp/Rtmp6pdKRq/R.INSTALL2038202f64fb/valr/src-i386' g++ -std=c++0x -I"D:/RCompile/recent/R-3.2.5/include" -DNDEBUG -I../inst/include -I"d:/RCompile/CRANpkg/lib/3.2/Rcpp/include" -I"d:/RCompile/CRANpkg/lib/3.2/BH/include" -I"d:/RCompile/CRANpkg/lib/3.2/dplyr/include" -I"d:/RCompile/r-compiling/local/local323/include" -O2 -Wall -mtune=core2 -c RcppExports.cpp -o RcppExports.o In file included from RcppExports.cpp:4:0: ../inst/include/valr.h:22:9: error: 'unordered_map' in namespace 'std' does not name a type ../inst/include/valr.h:23:8: error: 'genome_map_t' does not name a type make[1]: *** [RcppExports.o] Error 1 make[1]: Leaving directory `/cygdrive/d/temp/Rtmp6pdKRq/R.INSTALL2038202f64fb/valr/src-i386' Warning: running command 'make -f "Makevars.win" -f "D:/RCompile/recent/R-3.2.5/etc/i386/Makeconf" -f "D:/RCompile/recent/R-3.2.5/etc/i386/Makevars.site" -f "D:/RCompile/recent/R-3.2.5/share/make/winshlib.mk" CXX='$(CXX1X) $(CXX1XSTD)' CXXFLAGS='$(CXX1XFLAGS)' CXXPICFLAGS='$(CXX1XPICFLAGS)' SHLIB_LDFLAGS='$(SHLIB_CXX1XLDFLAGS)' SHLIB_LD='$(SHLIB_CXX1XLD)' SHLIB="valr.dll" OBJECTS="RcppExports.o absdist.o closest.o complement.o coverage.o init.o intersect.o merge.o random.o reldist.o shuffle.o subtract.o utils.o" symbols.rds' had status 2 ERROR: compilation failed for package 'valr' * removing 'd:/Rcompile/CRANpkg/lib/3.2/valr'