analyzedata             Returns a matrix of event counts or raw
                        medians, as specified by inputs. Columns
                        correspond to fcs files and rows to markers in
                        cell types
asinnorm                Computes the arcsinh ratio of a matrix in
                        relation to the specified column
calcperevent            Calculates percentages of of cell types of
                        interest out of total cell population
filterfiles             Filters a list of fcs files by search terms
get1status              Filters matrix based on single sample name
                        condition
get2status              Filters matrix columns based on two conditions
                        per file, e.g. patient status, stimluation,
                        time points, etc.
getfcsfiles             Gets fcs ID numbers and sample names from a
                        given experiment
getmarkers              Gets appropriate marker IDs for channels of
                        interest
getnewind               Rearranges signaling results matrix with rows
                        in the desired order as outputs
getpops                 Gets appropriate gate set IDs for populations
                        of interest
getrawsignals           Computes the untransformed medians for cellular
                        markers in populations of interest
parseevents             Modifies the list obtained from a call to
                        statistics.events to a matrix with rows
                        corresponding to fcs files and columns
                        corresponding to the population types
parsestats              Takes the results of a call to
                        statistics.general and returns a matrix of raw
                        medians with columns corresponding to fcs files
                        and rows to molecules of interest in different
                        cell types
parsestatsmean          Takes the results of a call to
                        statistics.general and returns a matrix of raw
                        means with columns corresponding to fcs files
                        and rows to molecules of interest in different
                        cell types
percentevent            Calculates the percentage of cell populations
                        given an experiment
