Package: HTSSIP
Type: Package
Title: High Throughput Sequencing of Stable Isotope Probing Data
        Analysis
Version: 1.3.0
Authors@R: c(
    person("Nicholas", "Youngblut", email="nyoungb2@gmail.com", role=c("aut", "cre")),
    person("Samuel", "Barnett", email="seb369@cornell.edu", role=c("ctb"))
    )
Maintainer: Nicholas Youngblut <nyoungb2@gmail.com>
Description: Functions for analyzing high throughput sequencing 
    stable isotope probing (HTS-SIP) data.
    Analyses include high resolution stable isotope probing (HR-SIP),
    multi-window high resolution stable isotope probing (MW-HR-SIP), 
    and quantitative stable isotope probing (q-SIP). 
License: GPL-2 | file LICENSE
LazyData: TRUE
Depends: R (>= 3.1.2)
Imports: igraph(>= 1.0.1), ape(>= 4.1), magrittr (>= 1.5), stringr (>=
        1.0.0), plyr (>= 1.8.4), dplyr (>= 0.5.0), tidyr (>= 0.5.1),
        ggplot2 (>= 2.1.0), vegan (>= 2.4.3), DESeq2 (>= 1.10.1),
        phyloseq (>= 1.19.1), coenocliner (>= 0.2.2), lazyeval(>=
        0.2.0)
RoxygenNote: 6.0.1
Suggests: testthat, knitr, rmarkdown, doParallel
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2017-10-25 19:31:08 UTC; nick
Author: Nicholas Youngblut [aut, cre],
  Samuel Barnett [ctb]
Repository: CRAN
Date/Publication: 2017-10-25 20:32:39 UTC
Built: R 3.3.3; ; 2017-10-29 11:01:40 UTC; windows
