* using log directory 'd:/Rcompile/CRANpkg/local/3.3/ParamHelpers.Rcheck' * using R version 3.3.3 (2017-03-06) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'ParamHelpers/DESCRIPTION' ... OK * this is package 'ParamHelpers' version '1.10' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'ParamHelpers' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK ** checking loading without being on the library search path ... OK ** checking use of S3 registration ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK ** checking loading without being on the library search path ... OK ** checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking compiled code ... OK * checking examples ... ** running examples for arch 'i386' ... [1s] OK ** running examples for arch 'x64' ... [1s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... ** running tests for arch 'i386' ... [16s] ERROR Running 'run-all.R' [15s] Running the tests in 'tests/run-all.R' failed. Complete output: > library(testthat) > library(BBmisc) > library(ParamHelpers) > > test_check("ParamHelpers") -- 1. Error: plotEAF works (@test_plotEAF.R#27) ------------------------------- formula missing 1: plotEAF(opt.paths) at testthat/test_plotEAF.R:27 2: do.call(eaf::eafplot, args) 3: (function (x, ...) UseMethod("eafplot"))(xlab = "y1", ylab = "y2", percentiles = 50, col = c("darkgrey", "darkgrey", "darkgrey", "black", "black", "black"), lty = c("solid", "dashed", "dotdash", "solid", "dashed", "dotdash"), x = y1 + y2 ~ .repl, data = structure(list(y1 = c(-2.53069421514991, -1.27504334129961, -0.967390919805399, -1.863308802923, -0.637773527997909, 0.550080852907799, -0.295601564362297, -1.87245109000301, -0.183699779579032, -2.00584987880345, -2.05385109744065, -1.28245217248793, -1.26658050130176, -0.472116100048603, -0.105710852720801, 0.42024133453682, -1.31948235221208, -3.2775478819046, -0.00961050514302816, -1.7713304523883, -0.51959583301845, -1.66892642194109), y2 = c(0.680544878288461, -0.186499261861493, -0.192669897374215, -0.0645318181942027, -1.2660179247235, -2.45492897982461, -0.894728699075235, -0.641168883278613, -1.76237465555083, 0.179384003567178, -1.9298929622006, -0.809820416364817, -0.875536191007198, -0.397337792648742, -0.75270572091059, -1.81551701616017, -0.306073509022368, -0.302017740894548, -2.53545942614891, 0.422975436239536, -2.47230070010972, -1.46055918222656), .algo = structure(c(1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 3L, 3L, 3L, 3L ), .Label = c("algo1", "algo2", "algo3"), class = "factor"), .repl = c(1L, 1L, 1L, 1L, 1L, 2L, 2L, 2L, 2L, 2L, 3L, 1L, 1L, 2L, 2L, 2L, 2L, 2L, 1L, 1L, 1L, 1L)), .Names = c("y1", "y2", ".algo", ".repl"), row.names = c("5", "7", "12", "15", "19", "2", "51", "6", "151", "20", "8", "22", "52", "21", "3", "11", "17", "18", "1", "71", "81", "181" ), class = "data.frame"), groups = .algo, maximise = structure(c(FALSE, FALSE), .Names = c("y1", "y2"))) 4: eafplot.formula(xlab = "y1", ylab = "y2", percentiles = 50, col = c("darkgrey", "darkgrey", "darkgrey", "black", "black", "black"), lty = c("solid", "dashed", "dotdash", "solid", "dashed", "dotdash"), x = y1 + y2 ~ .repl, data = structure(list(y1 = c(-2.53069421514991, -1.27504334129961, -0.967390919805399, -1.863308802923, -0.637773527997909, 0.550080852907799, -0.295601564362297, -1.87245109000301, -0.183699779579032, -2.00584987880345, -2.05385109744065, -1.28245217248793, -1.26658050130176, -0.472116100048603, -0.105710852720801, 0.42024133453682, -1.31948235221208, -3.2775478819046, -0.00961050514302816, -1.7713304523883, -0.51959583301845, -1.66892642194109), y2 = c(0.680544878288461, -0.186499261861493, -0.192669897374215, -0.0645318181942027, -1.2660179247235, -2.45492897982461, -0.894728699075235, -0.641168883278613, -1.76237465555083, 0.179384003567178, -1.9298929622006, -0.809820416364817, -0.875536191007198, -0.397337792648742, -0.75270572091059, -1.81551701616017, -0.306073509022368, -0.302017740894548, -2.53545942614891, 0.422975436239536, -2.47230070010972, -1.46055918222656), .algo = structure(c(1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 3L, 3L, 3L, 3L ), .Label = c("algo1", "algo2", "algo3"), class = "factor"), .repl = c(1L, 1L, 1L, 1L, 1L, 2L, 2L, 2L, 2L, 2L, 3L, 1L, 1L, 2L, 2L, 2L, 2L, 2L, 1L, 1L, 1L, 1L)), .Names = c("y1", "y2", ".algo", ".repl"), row.names = c("5", "7", "12", "15", "19", "2", "51", "6", "151", "20", "8", "22", "52", "21", "3", "11", "17", "18", "1", "71", "81", "181" ), class = "data.frame"), groups = .algo, maximise = structure(c(FALSE, FALSE), .Names = c("y1", "y2"))) 5: stop("formula missing") == testthat results =========================================================== OK: 1036 SKIPPED: 1 FAILED: 1 1. Error: plotEAF works (@test_plotEAF.R#27) Error: testthat unit tests failed Execution halted ** running tests for arch 'x64' ... [19s] ERROR Running 'run-all.R' [19s] Running the tests in 'tests/run-all.R' failed. Complete output: > library(testthat) > library(BBmisc) > library(ParamHelpers) > > test_check("ParamHelpers") -- 1. Error: plotEAF works (@test_plotEAF.R#27) ------------------------------- formula missing 1: plotEAF(opt.paths) at testthat/test_plotEAF.R:27 2: do.call(eaf::eafplot, args) 3: (function (x, ...) UseMethod("eafplot"))(xlab = "y1", ylab = "y2", percentiles = 50, col = c("darkgrey", "darkgrey", "darkgrey", "black", "black", "black"), lty = c("solid", "dashed", "dotdash", "solid", "dashed", "dotdash"), x = y1 + y2 ~ .repl, data = structure(list(y1 = c(-2.53069421514991, -1.27504334129961, -0.967390919805399, -1.863308802923, -0.637773527997909, 0.550080852907799, -0.295601564362297, -1.87245109000301, -0.183699779579031, -2.00584987880345, -2.05385109744065, -1.28245217248793, -1.26658050130176, -0.472116100048603, -0.105710852720801, 0.42024133453682, -1.31948235221208, -3.2775478819046, -0.00961050514302816, -1.7713304523883, -0.51959583301845, -1.66892642194109), y2 = c(0.680544878288461, -0.186499261861493, -0.192669897374215, -0.0645318181942027, -1.2660179247235, -2.45492897982461, -0.894728699075235, -0.641168883278613, -1.76237465555083, 0.179384003567178, -1.9298929622006, -0.809820416364817, -0.875536191007199, -0.397337792648742, -0.75270572091059, -1.81551701616017, -0.306073509022368, -0.302017740894548, -2.53545942614891, 0.422975436239536, -2.47230070010972, -1.46055918222656), .algo = structure(c(1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 3L, 3L, 3L, 3L ), .Label = c("algo1", "algo2", "algo3"), class = "factor"), .repl = c(1L, 1L, 1L, 1L, 1L, 2L, 2L, 2L, 2L, 2L, 3L, 1L, 1L, 2L, 2L, 2L, 2L, 2L, 1L, 1L, 1L, 1L)), .Names = c("y1", "y2", ".algo", ".repl"), row.names = c("5", "7", "12", "15", "19", "2", "51", "6", "151", "20", "8", "22", "52", "21", "3", "11", "17", "18", "1", "71", "81", "181" ), class = "data.frame"), groups = .algo, maximise = structure(c(FALSE, FALSE), .Names = c("y1", "y2"))) 4: eafplot.formula(xlab = "y1", ylab = "y2", percentiles = 50, col = c("darkgrey", "darkgrey", "darkgrey", "black", "black", "black"), lty = c("solid", "dashed", "dotdash", "solid", "dashed", "dotdash"), x = y1 + y2 ~ .repl, data = structure(list(y1 = c(-2.53069421514991, -1.27504334129961, -0.967390919805399, -1.863308802923, -0.637773527997909, 0.550080852907799, -0.295601564362297, -1.87245109000301, -0.183699779579031, -2.00584987880345, -2.05385109744065, -1.28245217248793, -1.26658050130176, -0.472116100048603, -0.105710852720801, 0.42024133453682, -1.31948235221208, -3.2775478819046, -0.00961050514302816, -1.7713304523883, -0.51959583301845, -1.66892642194109), y2 = c(0.680544878288461, -0.186499261861493, -0.192669897374215, -0.0645318181942027, -1.2660179247235, -2.45492897982461, -0.894728699075235, -0.641168883278613, -1.76237465555083, 0.179384003567178, -1.9298929622006, -0.809820416364817, -0.875536191007199, -0.397337792648742, -0.75270572091059, -1.81551701616017, -0.306073509022368, -0.302017740894548, -2.53545942614891, 0.422975436239536, -2.47230070010972, -1.46055918222656), .algo = structure(c(1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 3L, 3L, 3L, 3L ), .Label = c("algo1", "algo2", "algo3"), class = "factor"), .repl = c(1L, 1L, 1L, 1L, 1L, 2L, 2L, 2L, 2L, 2L, 3L, 1L, 1L, 2L, 2L, 2L, 2L, 2L, 1L, 1L, 1L, 1L)), .Names = c("y1", "y2", ".algo", ".repl"), row.names = c("5", "7", "12", "15", "19", "2", "51", "6", "151", "20", "8", "22", "52", "21", "3", "11", "17", "18", "1", "71", "81", "181" ), class = "data.frame"), groups = .algo, maximise = structure(c(FALSE, FALSE), .Names = c("y1", "y2"))) 5: stop("formula missing") == testthat results =========================================================== OK: 1036 SKIPPED: 1 FAILED: 1 1. Error: plotEAF works (@test_plotEAF.R#27) Error: testthat unit tests failed Execution halted * checking PDF version of manual ... OK * DONE Status: 2 ERRORs