* using log directory 'd:/Rcompile/CRANpkg/local/3.3/mvbutils.Rcheck' * using R version 3.3.2 (2016-10-31) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'mvbutils/DESCRIPTION' ... OK * this is package 'mvbutils' version '2.7.4.1' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'mvbutils' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... NOTE Malformed Title field: should not end in a period. * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... NOTE ':::' calls which should be '::': 'base:::call' 'base:::importIntoEnv' 'base:::lockEnvironment' 'base:::match.call' 'base:::print.default' 'base:::print.function' 'tools:::Rd2txt' 'utils:::?' See the note in ?`:::` about the use of this operator. Unexported objects imported by ':::' calls: 'tools:::.Rd_get_metadata' 'tools:::.get_package_metadata' 'tools:::.install_package_Rd_indices' 'tools:::.install_package_Rd_objects' 'tools:::.install_package_description' 'tools:::.install_package_namespace_info' 'tools:::.read_description' 'tools:::.writePkgIndices' 'tools:::.writeVignetteHtmlIndex' 'tools:::RdTags' 'tools:::fetchRdDB' 'tools:::makeLazyLoadDB' 'tools:::prepare_Rd' See the note in ?`:::` about the use of this operator. There are ::: calls to the package's namespace in its code. A package almost never needs to use ::: for its own objects: 'Save' 'body.print.function' 'cd' 'rbind.data.frame' 'search.task.trees' 'untetherBalloon' * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE .onLoad : f: no visible binding for global variable 'blah' .onLoad : : no visible binding for global variable 'package' .onLoad: no visible binding for global variable 'tasks' .onLoad: no visible binding for global variable 'ROOT' .onLoad: no visible binding for global variable 'mvbutils' FF: no visible binding for global variable 'w' FF: no visible binding for global variable 'mods.in.packages' FF: no visible binding for global variable 'mods.in.tasks' FF: no visible binding for global variable 'tracees' FF: no visible binding for global variable 'mtrace' Save.pos: no visible global function definition for 'check.for.tracees' Save.pos: no visible binding for global variable 'tracees' Save.pos: no visible binding for global variable 'mtrace' cd: no visible binding for global variable 'last.warning' cd: no visible binding for global variable '.Traceback' cd: no visible binding for global variable '.Saved.plots' cd: no visible binding for global variable '.' cd..: no visible binding for global variable 'execute.Last' cd..: no visible binding for global variable 'orig.path' cd.load: no visible binding for global variable '.' cd.load: no visible binding for global variable 'execute.First' cd.write.mvb.tasks: no visible binding for global variable '.' cdfind: no visible binding for global variable '.' cdregexpr: no visible binding for global variable '.' cdtree: no visible binding for global variable '.' cdtree: no visible binding for global variable 'x' char.unlist: no visible global function definition for 'getSlots' check.pkg: no visible binding for global variable 'subdir' copy.ns.objects : icns : f: no visible binding for global variable 'blah' create.backups: no visible binding for global variable '.' cull.old.builds: no visible binding for global variable 'subdir' cull.old.builds: no visible binding for global variable 'dir.' demlazy: no visible binding for global variable '.' discard.mouldering.backups: no visible binding for global variable 'backup.fix' doc2Rd: no visible binding for global variable '.' doc2Rd: no visible binding for global variable 'docType' doc2Rd: no visible binding for global variable 'title' doc2Rd: no visible binding for global variable 'author' dont.save: no visible binding for global variable '.SavedPlots' dont.save: no visible binding for global variable 'last.warning' dont.save: no visible binding for global variable '.Traceback' find.and.get: no visible binding for global variable 'name' find.and.get: no visible binding for global variable 'fixing' find.and.get: no visible binding for global variable 'tracees' find.and.get: no visible binding for global variable 'what' find.derefs: no visible binding for global variable '.' find.documented : findo: no visible binding for global variable '.' find.web: no visible binding for global variable 'generics' find.web: no visible binding for global variable 'where' find.web: no visible binding for global variable 'textcolor' find.web: no visible binding for global variable 'prune' find.web: no visible binding for global variable 'highlight' fixr: no visible binding for global variable 'load.from' fixr: no visible binding for global variable 'name.load.from' fixr: no visible binding for global variable 'trace.was.on' fixr: no visible global function definition for 'mtrace' fixr: no visible binding for global variable 'type.load.from' fixr: no visible binding for global variable 'package' fixr: no visible binding for global variable 'task' fixr.guts: no visible binding for global variable 'tracees' fixr.guts: no visible global function definition for 'mtrace' fixup.exports: no visible binding for global variable '.' fixup.help: no visible binding for global variable 'spath' fixup.help: no visible binding for global variable 'ipath' fixup.help: no visible binding for global variable 'force.all.docs' fixup.help: no visible binding for global variable 'dynamic.help' fixup.help: no visible binding for global variable 'pkg' fixup.help: no visible binding for global variable 'is.Rd2' fixup.vignettes: no visible binding for global variable 'subdir' fixup.vignettes: no visible binding for global variable 'ewhere' fixup.vignettes: no visible binding for global variable 'pkg' fixup.vignettes: no visible binding for global variable '.' fixup.vignettes: no visible binding for global variable 'ipath' foodweb: no visible global function definition for 'par' foodweb: no visible binding for global variable 'level' foodweb: no visible binding for global variable 'funmat' foodweb: no visible binding for global variable 'x' foodweb: no visible global function definition for 'plot' get.new.file.numbers: no visible binding for global variable '.' help2flatdoc: no visible binding for global variable '.' help2flatdoc: no visible binding for global variable 'USAGE' help2flatdoc: no visible binding for global variable 'EXAMPLES' hook.set.already: no visible binding for global variable 'prepend' internal.copy.ns.objects : f: no visible binding for global variable 'blah' load.live.package: no visible binding for '<<-' assignment to 'live.packages' load.live.package: no visible binding for global variable 'live.packages' load.maintained.package: no visible binding for global variable 'mvb.session.info' make.NAMESPACE: no visible binding for global variable '.' methodize.USAGE: no visible binding for global variable 'overall.name' mlazy: no visible binding for global variable '.' mlocal: no visible binding for global variable 'override.answer' move: no visible binding for global variable '.' move.fix.list: no visible binding for global variable 'what' move.fix.list: no visible binding for global variable 'to' move.to.mcache: no visible binding for global variable '.' mp.synch: no visible binding for global variable 'exports.have.changed' mtidy: no visible binding for global variable '.' mupdate.mcache: no visible binding for global variable '.' mvb.rbind.data.frame: no visible binding for global variable '.' not.for.packaging: no visible binding for global variable 'tasks' not.for.packaging: no visible binding for global variable '.Traceback' not.for.packaging: no visible binding for global variable 'last.warning' not.for.packaging: no visible binding for global variable '.SavedPlots' old.onLoad.stuff: no visible binding for global variable 'my.reps' organize.web.display: no visible binding for global variable 'n' organize.web.display: no visible binding for global variable 'funs' organize.web.display: no visible binding for global variable 'funmat' organize.web.display: no visible binding for global variable 'strwidth' organize.web.display: no visible global function definition for 'strwidth' organize.web.display: no visible binding for global variable 'minstrl' patch.installed: no visible binding for global variable 'dir.' patch.installed: no visible binding for global variable 'subdir' plot.foodweb: no visible global function definition for 'par' plot.foodweb: no visible global function definition for 'plot' plot.foodweb: no visible global function definition for 'segments' plot.foodweb: no visible global function definition for 'arrows' plot.foodweb: no visible binding for global variable 'strwidth' plot.foodweb: no visible binding for global variable 'strheight' plot.foodweb: no visible global function definition for 'text' pre.install: no visible binding for global variable 'subdir' pre.install: no visible binding for global variable 'dir.' pre.install: no visible binding for global variable 'R' pre.install: no visible binding for global variable 'man' pre.install: no visible binding for global variable 'inst' pre.install: no visible binding for global variable 'ewhere' pre.install : get.nondirs: no visible binding for global variable 'dir.' pre.install: no visible binding for global variable 'src' pre.install: no visible binding for global variable 'vignettes' pre.install: no visible binding for global variable 'exec' pre.install: no visible binding for global variable 'tests' pre.install: no visible binding for global variable '.' pre.install : : no visible binding for global variable 'ewhere' pre.install: no visible binding for global variable 'dll.paths' pre.install: no visible binding for global variable '.required' pre.install: no visible binding for global variable '.Depends' pre.install: no visible binding for global variable 'tasks' pre.install: no visible binding for global variable '.Traceback' pre.install: no visible binding for global variable 'last.warning' pre.install: no visible binding for global variable '.SavedPlots' pre.install: no visible binding for global variable 'task.path' pre.install: no visible binding for global variable 'env' pre.install: no visible binding for global variable '..' pre.install: no visible binding for global variable 'exclude.funs' pre.install: no visible binding for global variable 'exclude.data' pre.install : provisionally.add.man.file: no visible binding for global variable 'subdir' pre.install : Rdconv.internals: no visible binding for global variable 'ewhere' pre.install: no visible binding for global variable '.First.lib' pre.install: no visible binding for global variable '.Last.lib' pre.install: no visible binding for global variable '.onAttach' rbind.data.frame: no visible binding for global variable '.' rcmdgeneric.pkg: no visible binding for global variable 'dir.' rcmdgeneric.pkg: no visible binding for global variable 'subdir' rcmdgeneric.pkg: no visible binding for global variable 'ewhere' save.mchanged: no visible binding for global variable '.' save.refdb: no visible binding for global variable '.' save.refdb: no visible binding for global variable 'name' save.refdb: no visible binding for global variable 'task.tree' set.pkg.and.dir: no visible binding for global variable 'character.only' set.pkg.and.dir: no visible binding for global variable 'dir.above.source' set.rcmd.vars: no visible binding for global variable 'sep' setup.dontruns: no visible binding for global variable '.' setup.mcache: no visible binding for global variable '.' spkg: no visible binding for global variable 'subdir' subco: no visible binding for global variable 'Rd.version' unpackage: no visible binding for global variable '.' unpackage: no visible binding for global variable 'CONTENTS' unpackage: no visible binding for global variable 'INDEX' unpackage: no visible binding for global variable 'MD5' unpackage: no visible binding for global variable 'NAMESPACE' unpackage: no visible binding for global variable '..' unpackage: no visible binding for global variable 'src' unpackage: no visible binding for global variable 'chtml' unpackage: no visible binding for global variable 'html' unpackage: no visible binding for global variable 'latex' unpackage: no visible binding for global variable 'meta' unpackage: no visible binding for global variable 'R' unpackage: no visible binding for global variable 'libs' update.loaded.pkg: no visible binding for global variable 'doc' update.loaded.pkg: no visible binding for global variable 'export.me' write.sourceable.function: no visible binding for global variable 'bug.position' Undefined global functions or variables: . .. .Depends .First.lib .Last.lib .Saved.plots .SavedPlots .Traceback .onAttach .required CONTENTS EXAMPLES INDEX MD5 NAMESPACE R ROOT Rd.version USAGE arrows author backup.fix blah bug.position character.only check.for.tracees chtml dir. dir.above.source dll.paths doc docType dynamic.help env ewhere exclude.data exclude.funs exec execute.First execute.Last export.me exports.have.changed fixing force.all.docs funmat funs generics getSlots highlight html inst ipath is.Rd2 last.warning latex level libs live.packages load.from man meta minstrl mods.in.packages mods.in.tasks mtrace mvb.session.info mvbutils my.reps n name name.load.from orig.path overall.name override.answer package par pkg plot prepend prune segments sep spath src strheight strwidth subdir task task.path task.tree tasks tests text textcolor title to trace.was.on tracees type.load.from vignettes w what where x Consider adding importFrom("graphics", "arrows", "par", "plot", "segments", "strheight", "strwidth", "text", "title") importFrom("methods", "getSlots") to your NAMESPACE file (and ensure that your DESCRIPTION Imports field contains 'methods'). * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... [10s] OK * checking PDF version of manual ... OK * DONE Status: 3 NOTEs