* using log directory 'd:/Rcompile/CRANpkg/local/3.3/rphylotastic.Rcheck'
* using R version 3.3.3 (2017-03-06)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* checking for file 'rphylotastic/DESCRIPTION' ... OK
* this is package 'rphylotastic' version '0.0.4'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'rphylotastic' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... [19s] OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... [34s] ERROR
  Running 'test-all.R' [33s]
Running the tests in 'tests/test-all.R' failed.
Complete output:
  > ###
  > library(testthat)
  > test_check('rphylotastic')
  Loading required package: rphylotastic
  -- 1. Error: Get genome species works (@test_getspecies.R#13)  -----------------
  HTTP error 500.
  1: taxon_get_species_with_genome("Rodentia") at testthat/test_getspecies.R:13
  2: jsonlite::fromJSON(paste(get_base_url(), "ts/ncbi/genome_species?taxon=", utils::URLencode(taxon), 
         sep = ""))
  3: fromJSON_string(txt = txt, simplifyVector = simplifyVector, simplifyDataFrame = simplifyDataFrame, 
         simplifyMatrix = simplifyMatrix, flatten = flatten, ...)
  4: parseJSON(txt, bigint_as_char)
  5: parse_con(txt, bigint_as_char)
  6: open(con, "rb")
  7: open.connection(con, "rb")
  
  == testthat results  ===========================================================
  OK: 35 SKIPPED: 0 FAILED: 1
  1. Error: Get genome species works (@test_getspecies.R#13) 
  
  Error: testthat unit tests failed
  Execution halted
* checking PDF version of manual ... OK
* DONE
Status: 1 ERROR