buildCIM                Builds Chromosomal Interactions Maps
chromoR-package         Analysis of chromosomal interactions data (Hi-C
                        data)
compareCIM              Compares 2 CIMs
correctCIM              Corrects a chromosomal interactions map (CIM)
correctPairCIM          Corrects a pairwise CIM
imr90.1                 A corrected CIM of replicate 1 of IMR90, for
                        chromosomes 1 and 2
imr90.1.obs             A non-corrected CIM of replicate 1 of IMR90,
                        for chromosomes 1 and 2
imr90.2                 A CIM of replicate 2 of IMR90, for chromosomes
                        1 and 2
seg                     A segmentation for imr90.1 and imr90.2 CIMs
seg.imr90.obs           A segmentation for imr90.1.obs CIM
segmentCIM              Segments a 1D contact profile (1D CIM)
