CUB                     Computes the Codon Usage Bias of DNA sequences
div                     Computation of the synonymous divergence
                        between sequences
image.vhica             Consistency matrix for a transposable element
                        in the VHICA analysis.
plot.vhica              Plots a VHICA regression between two species.
read.vhica              Reads divergence and codon usage data files for
                        the VHICA method.
vhica-package           Vertical and Horizontal Inheritance Consistence
                        Analysis
