BeckLee                 Beck and Lee 2014 datasets
BeckLee_disparity       BeckLee_disparity
Claddis.ordination      Imports data from Claddis
add.tree                Add, get or remove tree
adonis.dispRity         adonis dispRity (from 'vegan::adonis')
apply.NA                Apply inapplicable characters to a matrix.
bhatt.coeff             Bhattacharrya Coefficient
boot.matrix             Bootstraps and rarefies data.
char.diff               Character differences
check.morpho            Check a morphological matrix consistency
                        levels.
chrono.subsets          Separating data in chronological subsets.
clean.data              Cleaning phylogenetic data
combine.subsets         Combines or cleans subsets.
crown.stem              Separates stem and crown species
custom.subsets          Separating data into custom subsets.
demo_data               Demo datasets
dispRity                Calculates disparity from a matrix.
dispRity-package        Measuring Disparity in R
dispRity.metric         Disparity metrics
dispRity.per.group      Disparity in different groups.
dispRity.through.time   Disparity through time.
disparity               disparity
dtt.dispRity            dtt dispRity (from 'geiger::dtt')
extinction.subsets      Getting the time subsets from at and after an
                        extinction event
extract.dispRity        Extracting disparity values.
fill.dispRity           Fills a 'dispRity' object.
geomorph.ordination     Imports data from geomorph
get.bin.ages            Get time bins ages
get.contrast.matrix     Generates a contrast matrix.
get.subsets             Extracts subsets from a dispRity object.
make.dispRity           Creates a 'dispRity' object.
make.metric             Creating disparity metrics
matrix.dispRity         Fetching a matrix from a 'dispRity' object.
model.test              Model Test
model.test.sim          Simulate Model Test
model.test.wrapper      Model test wrapper
multi.ace               Ancestral states estimations with multiple
                        trees
n.subsets               Number of subsets.
null.test               Testing a null hypothesis on multidimensional
                        data.
pair.plot               Plots pairwise comparisons
plot.char.diff          Plots character differences
plot.dispRity           dispRity object plotting
print.dispRity          Prints a 'dispRity' object.
random.circle           Random circle
randtest.dispRity       Random (permutation) test
reduce.matrix           Reduce a matrix
reduce.space            Reduce space
remove.zero.brlen       Remove zero branch length
rescale.dispRity        Rescaling and centering disparity results.
sim.morpho              Simulates morphological data.
size.subsets            Size subsets.
slice.tree              Time slicing a tree.
slide.nodes             Stretching a tree
sort.dispRity           Sorting or ordering a 'dispRity' object.
space.maker             Creating multidimensional spaces
summary.dispRity        dispRity object summary
test.dispRity           Testing disparity hypotheses
test.metric             Test disparity metric
tree.age                Calculating the age of nodes and tips in a
                        tree.
