Warning: no access to tty (Bad file descriptor). Thus no job control in this shell. lmbwide.login complete +------------------------------------------------ LMB crystallography software CCP4 release 6.5 installed 12/01/2015 updated Feb 201 Phil Evans If you really want to use the older (6.4.0) version, edit your .login to "source /public/xtal/ccp4/xtal-6.4.0.login" and login again ------------------------------------------------------------------------------ phenix release 1.10 installed 9.9.15 Phil Evans Type "phenix &" to get GUI ------------------------------------------------------------------------------ sharp server is on hal:8082, Sharp version 2.8.2 Phil Evans/Roger Williams ------------------------------------------------------------------------------ coot now points to the very latest. Stable coot is available with old-coot ------------------------------------------------------------------------------ imosflm (1.0.7) and ipmosflm (7.0.9) May 2012 ------------------------------------------------------------------------------ qtmg or ccp4mg run the CCP4 molecular graphics program ------------------------------------------------------------------------------ MAIN 2014 Jan Löwe 10/14 ------------------------------------------------------------------------------ ************************************************** MRC image processing programs have moved. You are using image2010 by default. If you wish to use the frozen image2000 you need to : source /public/EM/image2000/com/image.login and source /public/EM/image2000/com/image.cshrc Jude Short (F46 x2039 jms@mrc-lmb.cam.ac.uk) 09.03.2011 ************************************************** === RELION MPI setup === + Number of MPI processes = 12 + Number of threads per MPI process = 6 + Total number of threads therefore = 72 + Master (0) runs on host = fmb346.lmb.internal + Slave 3 runs on host = fmb346.lmb.internal + Slave 1 runs on host = fmb307.lmb.internal + Slave 6 runs on host = fmb346.lmb.internal + Slave 9 runs on host = fmb346.lmb.internal + Slave 4 runs on host = fmb307.lmb.internal ================= + Slave 2 runs on host = fmb194.lmb.internal + Slave 5 runs on host = fmb194.lmb.internal + Slave 10 runs on host = fmb307.lmb.internal + Slave 8 runs on host = fmb194.lmb.internal + Slave 7 runs on host = fmb307.lmb.internal + Slave 11 runs on host = fmb194.lmb.internal Running in double precision. Estimating accuracies in the orientational assignment ... 000/??? sec ~~(,_,"> [oo] 0/ 0 sec ..~~(,_,"> 1/ 15 sec ...~~(,_,"> 2/ 20 sec ......~~(,_,"> 2/ 15 sec .......~~(,_,"> 3/ 18 sec ..........~~(,_,"> 4/ 20 sec ...........~~(,_,"> 4/ 17 sec ..............~~(,_,"> 5/ 18 sec ...............~~(,_,"> 6/ 20 sec ..................~~(,_,"> 6/ 18 sec ...................~~(,_,"> 7/ 19 sec ......................~~(,_,"> 7/ 17 sec .......................~~(,_,"> 7/ 16 sec ..........................~~(,_,"> 8/ 17 sec ...........................~~(,_,"> 8/ 16 sec ..............................~~(,_,"> 9/ 16 sec ...............................~~(,_,"> 9/ 15 sec ..................................~~(,_,"> 9/ 15 sec ....................................~~(,_,"> 10/ 15 sec ......................................~~(,_,"> 10/ 15 sec .......................................~~(,_,"> 10/ 14 sec ..........................................~~(,_,"> 11/ 15 sec ............................................~~(,_,"> 11/ 14 sec ..............................................~~(,_,"> 12/ 15 sec ................................................~~(,_,"> 12/ 14 sec ..................................................~~(,_,"> 13/ 15 sec ....................................................~~(,_,"> 13/ 14 sec ......................................................~~(,_,"> 13/ 13 sec ........................................................~~(,_,"> 14/ 14 sec ..........................................................~~(,_,"> 14/ 14 sec ............................................................~~(,_,"> Auto-refine: Estimated accuracy angles= 0.68 degrees; offsets= 0.49 pixels CurrentResolution= 20.6667 Angstroms, which requires orientationSampling of at least 6.66667 degrees for a particle of diameter 350 Angstroms Oversampling= 0 NrHiddenVariableSamplingPoints= 4374 OrientationalSampling= 7.5 NrOrientations= 18 TranslationalSampling= 2 NrTranslations= 81 ============================= Oversampling= 1 NrHiddenVariableSamplingPoints= 279936 OrientationalSampling= 3.75 NrOrientations= 144 TranslationalSampling= 1 NrTranslations= 648 ============================= Estimated memory for expectation step > 1.38917 Gb, available memory = 24 Gb. Estimated memory for maximization step > 0.0692182 Gb, available memory = 24 Gb. Expectation iteration 6 of 10 000/??? sec ~~(,_,"> [oo] 0.28/12.27 min .~~(,_,"> 0.45/12.30 min ..~~(,_,"> 0.82/16.33 min ...~~(,_,"> 0.93/14.70 min ...~~(,_,"> 1.32/17.12 min ....~~(,_,"> 1.45/16.03 min .....~~(,_,"> 1.78/17.17 min ......~~(,_,"> 2.07/17.62 min .......~~(,_,"> 2.35/17.97 min .......~~(,_,"> 2.63/18.25 min ........~~(,_,"> 2.78/17.65 min .........~~(,_,"> 3.17/18.50 min ..........~~(,_,"> 3.28/17.78 min ...........~~(,_,"> 3.63/18.33 min ...........~~(,_,"> 3.85/18.20 min ............~~(,_,"> 4.20/18.67 min .............~~(,_,"> 4.48/18.80 min ..............~~(,_,"> 4.72/18.72 min ...............~~(,_,"> 5.02/18.90 min ...............~~(,_,"> 5.25/18.82 min ................~~(,_,"> 5.52/18.87 min .................~~(,_,"> 5.70/18.63 min ..................~~(,_,"> 6.00/18.78 min ...................~~(,_,"> 6.37/19.13 min ...................~~(,_,"> 6.55/18.92 min ....................~~(,_,"> 6.85/19.03 min .....................~~(,_,"> 7.03/18.85 min ......................~~(,_,"> 7.40/19.13 min .......................~~(,_,"> 7.62/19.03 min .......................~~(,_,"> 7.88/19.07 min ........................~~(,_,"> 8.12/19.00 min .........................~~(,_,"> 8.35/18.95 min ..........................~~(,_,"> 8.67/19.08 min ...........................~~(,_,"> 8.98/19.22 min ............................~~(,_,"> 9.12/18.95 min ............................~~(,_,"> 9.43/19.08 min .............................~~(,_,"> 9.62/18.93 min ..............................~~(,_,"> 10.02/19.22 min ...............................~~(,_,"> 10.18/19.03 min ................................~~(,_,"> 10.60/19.33 min ................................~~(,_,"> 10.73/19.10 min .................................~~(,_,"> 11.08/19.27 min ..................................~~(,_,"> 11.32/19.22 min ...................................~~(,_,"> 11.65/19.35 min ....................................~~(,_,"> 11.93/19.38 min ....................................~~(,_,"> 12.22/19.42 min .....................................~~(,_,"> 12.35/19.22 min ......................................~~(,_,"> 12.70/19.35 min .......................................~~(,_,"> 13.02/19.45 min ........................................~~(,_,"> 13.30/19.47 min ........................................~~(,_,"> 13.47/19.33 min .........................................~~(,_,"> 13.77/19.40 min ..........................................~~(,_,"> 14.13/19.53 min ...........................................~~(,_,"> 14.18/19.25 min ............................................~~(,_,"> 14.55/19.40 min .............................................~~(,_,"> 14.87/19.47 min .............................................~~(,_,"> 15.03/19.33 min ..............................................~~(,_,"> 15.35/19.42 min ...............................................~~(,_,"> 15.60/19.40 min ................................................~~(,_,"> 15.93/19.48 min .................................................~~(,_,"> 16.13/19.42 min .................................................~~(,_,"> 16.38/19.40 min ..................................................~~(,_,"> 16.75/19.52 min ...................................................~~(,_,"> 17.03/19.55 min ....................................................~~(,_,"> 17.35/19.60 min .....................................................~~(,_,"> 17.55/19.53 min .....................................................~~(,_,"> 17.82/19.53 min ......................................................~~(,_,"> 18.15/19.62 min .......................................................~~(,_,"> 18.25/19.43 min ........................................................~~(,_,"> 18.62/19.55 min .........................................................~~(,_,"> 18.83/19.50 min .........................................................~~(,_,"> 19.17/19.57 min ..........................................................~~(,_,"> 19.33/19.47 min ...........................................................~~(,_,"> 19.80/19.68 min ............................................................~~(,_,"> 19.80/19.80 min ............................................................~~(,_,"> Maximization ... 000/??? sec ~~(,_,"> [oo] 11/ 11 sec ............................................................~~(,_,"> Estimating accuracies in the orientational assignment ... 000/??? sec ~~(,_,"> [oo] 1/ 30 sec ..~~(,_,"> 2/ 30 sec ...~~(,_,"> 2/ 20 sec ......~~(,_,"> 3/ 22 sec .......~~(,_,"> 3/ 18 sec ..........~~(,_,"> 4/ 20 sec ...........~~(,_,"> 5/ 21 sec ..............~~(,_,"> 5/ 18 sec ...............~~(,_,"> 6/ 20 sec ..................~~(,_,"> 6/ 18 sec ...................~~(,_,"> 7/ 19 sec ......................~~(,_,"> 7/ 17 sec .......................~~(,_,"> 7/ 16 sec ..........................~~(,_,"> 8/ 17 sec ...........................~~(,_,"> 8/ 16 sec ..............................~~(,_,"> 9/ 16 sec ...............................~~(,_,"> 9/ 15 sec ..................................~~(,_,"> 9/ 15 sec ....................................~~(,_,"> 10/ 15 sec ......................................~~(,_,"> 10/ 15 sec .......................................~~(,_,"> 10/ 14 sec ..........................................~~(,_,"> 11/ 15 sec ............................................~~(,_,"> 11/ 14 sec ..............................................~~(,_,"> 12/ 15 sec ................................................~~(,_,"> 12/ 14 sec ..................................................~~(,_,"> 12/ 13 sec ....................................................~~(,_,"> 13/ 14 sec ......................................................~~(,_,"> 13/ 13 sec ........................................................~~(,_,"> 13/ 13 sec ..........................................................~~(,_,"> 14/ 14 sec ............................................................~~(,_,"> Auto-refine: Estimated accuracy angles= 0.57 degrees; offsets= 0.43 pixels CurrentResolution= 19.7273 Angstroms, which requires orientationSampling of at least 6.42857 degrees for a particle of diameter 350 Angstroms Oversampling= 0 NrHiddenVariableSamplingPoints= 4374 OrientationalSampling= 7.5 NrOrientations= 18 TranslationalSampling= 2 NrTranslations= 81 ============================= Oversampling= 1 NrHiddenVariableSamplingPoints= 279936 OrientationalSampling= 3.75 NrOrientations= 144 TranslationalSampling= 1 NrTranslations= 648 ============================= Estimated memory for expectation step > 1.51644 Gb, available memory = 24 Gb. Estimated memory for maximization step > 0.0759485 Gb, available memory = 24 Gb. Expectation iteration 7 of 10 000/??? sec ~~(,_,"> [oo] 0.32/13.72 min .~~(,_,"> 0.50/13.68 min ..~~(,_,"> 0.93/18.67 min ...~~(,_,"> 1.03/16.27 min ...~~(,_,"> 1.42/18.42 min ....~~(,_,"> 1.75/19.35 min .....~~(,_,"> 2.07/19.90 min ......~~(,_,"> 2.18/18.60 min .......~~(,_,"> 2.60/19.87 min .......~~(,_,"> 2.93/20.33 min ........~~(,_,"> 3.18/20.18 min .........~~(,_,"> 3.47/20.25 min ..........~~(,_,"> 3.83/20.75 min ...........~~(,_,"> 4.07/20.52 min ...........~~(,_,"> 4.40/20.80 min ............~~(,_,"> 4.67/20.73 min .............~~(,_,"> 4.98/20.88 min ..............~~(,_,"> 5.25/20.83 min ...............~~(,_,"> 5.52/20.78 min ...............~~(,_,"> 5.92/21.22 min ................~~(,_,"> 6.15/21.03 min .................~~(,_,"> 6.48/21.20 min ..................~~(,_,"> 6.73/21.08 min ...................~~(,_,"> 7.10/21.33 min ...................~~(,_,"> 7.32/21.13 min ....................~~(,_,"> 7.68/21.35 min .....................~~(,_,"> 8.10/21.70 min ......................~~(,_,"> 8.30/21.47 min .......................~~(,_,"> 8.52/21.28 min .......................~~(,_,"> 8.93/21.60 min ........................~~(,_,"> 9.18/21.50 min .........................~~(,_,"> 9.50/21.57 min ..........................~~(,_,"> 9.82/21.62 min ...........................~~(,_,"> 10.03/21.47 min ............................~~(,_,"> 10.47/21.77 min ............................~~(,_,"> 10.77/21.78 min .............................~~(,_,"> 10.98/21.63 min ..............................~~(,_,"> 11.35/21.77 min ...............................~~(,_,"> 11.68/21.85 min ................................~~(,_,"> 11.95/21.80 min ................................~~(,_,"> 12.20/21.72 min .................................~~(,_,"> 12.52/21.77 min ..................................~~(,_,"> 12.90/21.92 min ...................................~~(,_,"> 13.02/21.62 min ....................................~~(,_,"> 13.50/21.93 min ....................................~~(,_,"> 13.70/21.78 min .....................................~~(,_,"> 13.98/21.77 min ......................................~~(,_,"> 14.27/21.75 min .......................................~~(,_,"> 14.60/21.80 min ........................................~~(,_,"> 14.78/21.65 min ........................................~~(,_,"> 15.15/21.75 min .........................................~~(,_,"> 15.42/21.72 min ..........................................~~(,_,"> 15.70/21.70 min ...........................................~~(,_,"> 15.95/21.65 min ............................................~~(,_,"> 16.27/21.68 min .............................................~~(,_,"> 16.62/21.75 min .............................................~~(,_,"> 16.97/21.83 min ..............................................~~(,_,"> 17.17/21.72 min ...............................................~~(,_,"> 17.48/21.73 min ................................................~~(,_,"> 17.80/21.77 min .................................................~~(,_,"> 18.12/21.80 min .................................................~~(,_,"> 18.48/21.88 min ..................................................~~(,_,"> 18.63/21.72 min ...................................................~~(,_,"> 19.05/21.87 min ....................................................~~(,_,"> 19.37/21.88 min .....................................................~~(,_,"> 19.60/21.82 min .....................................................~~(,_,"> 19.97/21.90 min ......................................................~~(,_,"> 20.18/21.82 min .......................................................~~(,_,"> 20.55/21.88 min ........................................................~~(,_,"> 20.75/21.78 min .........................................................~~(,_,"> 21.05/21.80 min .........................................................~~(,_,"> 21.47/21.92 min ..........................................................~~(,_,"> 21.68/21.85 min ...........................................................~~(,_,"> 22.23/22.12 min ............................................................~~(,_,"> 22.23/22.23 min ............................................................~~(,_,"> Maximization ... 000/??? sec ~~(,_,"> [oo] 13/ 13 sec ............................................................~~(,_,"> Estimating accuracies in the orientational assignment ... 000/??? sec ~~(,_,"> [oo] 0/ 0 sec ..~~(,_,"> 1/ 15 sec ...~~(,_,"> 2/ 20 sec ......~~(,_,"> 3/ 22 sec .......~~(,_,"> 4/ 24 sec ..........~~(,_,"> 5/ 25 sec ...........~~(,_,"> 5/ 21 sec ..............~~(,_,"> 6/ 22 sec ...............~~(,_,"> 7/ 23 sec ..................~~(,_,"> 8/ 24 sec ...................~~(,_,"> 8/ 21 sec ......................~~(,_,"> 9/ 22 sec .......................~~(,_,"> 9/ 20 sec ..........................~~(,_,"> 10/ 21 sec ...........................~~(,_,"> 10/ 20 sec ..............................~~(,_,"> 11/ 20 sec ...............................~~(,_,"> 12/ 21 sec ..................................~~(,_,"> 12/ 20 sec ....................................~~(,_,"> 13/ 20 sec ......................................~~(,_,"> 13/ 19 sec .......................................~~(,_,"> 13/ 18 sec ..........................................~~(,_,"> 15/ 20 sec ............................................~~(,_,"> 16/ 20 sec ..............................................~~(,_,"> 16/ 20 sec ................................................~~(,_,"> 16/ 19 sec ..................................................~~(,_,"> 17/ 19 sec ....................................................~~(,_,"> 17/ 18 sec ......................................................~~(,_,"> 18/ 19 sec ........................................................~~(,_,"> 19/ 19 sec ..........................................................~~(,_,"> 19/ 19 sec ............................................................~~(,_,"> Auto-refine: Estimated accuracy angles= 0.54 degrees; offsets= 0.41 pixels CurrentResolution= 18.0833 Angstroms, which requires orientationSampling of at least 5.90164 degrees for a particle of diameter 350 Angstroms Oversampling= 0 NrHiddenVariableSamplingPoints= 4374 OrientationalSampling= 7.5 NrOrientations= 18 TranslationalSampling= 2 NrTranslations= 81 ============================= Oversampling= 1 NrHiddenVariableSamplingPoints= 279936 OrientationalSampling= 3.75 NrOrientations= 144 TranslationalSampling= 1 NrTranslations= 648 ============================= Estimated memory for expectation step > 1.79579 Gb, available memory = 24 Gb. Estimated memory for maximization step > 0.0906902 Gb, available memory = 24 Gb. Expectation iteration 8 of 10 000/??? sec ~~(,_,"> [oo] 0.48/20.93 min .~~(,_,"> 0.67/18.23 min ..~~(,_,"> 1.10/22.00 min ...~~(,_,"> 1.50/23.63 min ...~~(,_,"> 1.72/22.32 min ....~~(,_,"> 2.28/25.25 min .....~~(,_,"> 2.42/23.27 min ......~~(,_,"> 2.87/24.43 min .......~~(,_,"> 3.23/24.72 min .......~~(,_,"> 3.57/24.72 min ........~~(,_,"> 3.98/25.25 min .........~~(,_,"> 4.42/25.80 min ..........~~(,_,"> 4.73/25.63 min ...........~~(,_,"> 5.08/25.65 min ...........~~(,_,"> 5.42/25.60 min ............~~(,_,"> 5.78/25.70 min .............~~(,_,"> 6.22/26.07 min ..............~~(,_,"> 6.50/25.80 min ...............~~(,_,"> 6.82/25.68 min ...............~~(,_,"> 7.10/25.45 min ................~~(,_,"> 7.48/25.60 min .................~~(,_,"> 7.87/25.72 min ..................~~(,_,"> 8.30/26.00 min ...................~~(,_,"> 8.40/25.23 min ...................~~(,_,"> 8.97/25.90 min ....................~~(,_,"> 9.30/25.85 min .....................~~(,_,"> 9.60/25.72 min ......................~~(,_,"> 10.17/26.30 min .......................~~(,_,"> 10.43/26.08 min .......................~~(,_,"> 10.75/26.00 min ........................~~(,_,"> 11.13/26.07 min .........................~~(,_,"> 11.38/25.83 min ..........................~~(,_,"> 11.90/26.22 min ...........................~~(,_,"> 12.28/26.28 min ............................~~(,_,"> 12.52/26.03 min ............................~~(,_,"> 12.88/26.07 min .............................~~(,_,"> 13.30/26.18 min ..............................~~(,_,"> 13.63/26.15 min ...............................~~(,_,"> 14.00/26.18 min ................................~~(,_,"> 14.33/26.15 min ................................~~(,_,"> 14.73/26.23 min .................................~~(,_,"> 15.05/26.17 min ..................................~~(,_,"> 15.40/26.17 min ...................................~~(,_,"> 15.88/26.38 min ....................................~~(,_,"> 16.03/26.05 min ....................................~~(,_,"> 16.47/26.18 min .....................................~~(,_,"> 16.70/26.00 min ......................................~~(,_,"> 17.12/26.10 min .......................................~~(,_,"> 17.43/26.03 min ........................................~~(,_,"> 17.80/26.07 min ........................................~~(,_,"> 18.27/26.23 min .........................................~~(,_,"> 18.53/26.12 min ..........................................~~(,_,"> 18.85/26.07 min ...........................................~~(,_,"> 19.25/26.13 min ............................................~~(,_,"> 19.58/26.10 min .............................................~~(,_,"> 19.90/26.05 min .............................................~~(,_,"> 20.28/26.10 min ..............................................~~(,_,"> 20.55/26.00 min ...............................................~~(,_,"> 21.00/26.12 min ................................................~~(,_,"> 21.33/26.10 min .................................................~~(,_,"> 21.73/26.15 min .................................................~~(,_,"> 22.05/26.12 min ..................................................~~(,_,"> 22.38/26.08 min ...................................................~~(,_,"> 22.80/26.17 min ....................................................~~(,_,"> 23.12/26.12 min .....................................................~~(,_,"> 23.50/26.17 min .....................................................~~(,_,"> 23.75/26.05 min ......................................................~~(,_,"> 24.08/26.03 min .......................................................~~(,_,"> 24.53/26.13 min ........................................................~~(,_,"> 24.92/26.17 min .........................................................~~(,_,"> 25.13/26.03 min .........................................................~~(,_,"> 25.60/26.15 min ..........................................................~~(,_,"> 25.93/26.13 min ...........................................................~~(,_,"> 26.55/26.40 min ............................................................~~(,_,"> 26.55/26.55 min ............................................................~~(,_,"> Maximization ... 000/??? sec ~~(,_,"> [oo] 27/ 27 sec ............................................................~~(,_,"> Estimating accuracies in the orientational assignment ... 000/??? sec ~~(,_,"> [oo] 1/ 30 sec ..~~(,_,"> 2/ 30 sec ...~~(,_,"> 3/ 30 sec ......~~(,_,"> 3/ 22 sec .......~~(,_,"> 4/ 24 sec ..........~~(,_,"> 5/ 25 sec ...........~~(,_,"> 6/ 25 sec ..............~~(,_,"> 6/ 22 sec ...............~~(,_,"> 7/ 23 sec ..................~~(,_,"> 8/ 24 sec ...................~~(,_,"> 8/ 21 sec ......................~~(,_,"> 9/ 22 sec .......................~~(,_,"> 9/ 20 sec ..........................~~(,_,"> 10/ 21 sec ...........................~~(,_,"> 10/ 20 sec ..............................~~(,_,"> 11/ 20 sec ...............................~~(,_,"> 11/ 19 sec ..................................~~(,_,"> 12/ 20 sec ....................................~~(,_,"> 12/ 18 sec ......................................~~(,_,"> 13/ 19 sec .......................................~~(,_,"> 13/ 18 sec ..........................................~~(,_,"> 14/ 19 sec ............................................~~(,_,"> 14/ 18 sec ..............................................~~(,_,"> 15/ 18 sec ................................................~~(,_,"> 15/ 18 sec ..................................................~~(,_,"> 16/ 18 sec ....................................................~~(,_,"> 16/ 17 sec ......................................................~~(,_,"> 17/ 18 sec ........................................................~~(,_,"> 17/ 17 sec ..........................................................~~(,_,"> 18/ 18 sec ............................................................~~(,_,"> Auto-refine: Estimated accuracy angles= 0.53 degrees; offsets= 0.4 pixels CurrentResolution= 17.36 Angstroms, which requires orientationSampling of at least 5.625 degrees for a particle of diameter 350 Angstroms Oversampling= 0 NrHiddenVariableSamplingPoints= 4374 OrientationalSampling= 7.5 NrOrientations= 18 TranslationalSampling= 2 NrTranslations= 81 ============================= Oversampling= 1 NrHiddenVariableSamplingPoints= 279936 OrientationalSampling= 3.75 NrOrientations= 144 TranslationalSampling= 1 NrTranslations= 648 ============================= Estimated memory for expectation step > 1.94839 Gb, available memory = 24 Gb. Estimated memory for maximization step > 0.0987273 Gb, available memory = 24 Gb. Expectation iteration 9 of 10 000/??? sec ~~(,_,"> [oo] 0.38/16.60 min .~~(,_,"> 0.68/18.70 min ..~~(,_,"> 1.17/23.33 min ...~~(,_,"> 1.52/23.88 min ...~~(,_,"> 1.95/25.35 min ....~~(,_,"> 2.20/24.33 min .....~~(,_,"> 2.58/24.87 min ......~~(,_,"> 3.05/26.00 min .......~~(,_,"> 3.38/25.87 min .......~~(,_,"> 3.85/26.68 min ........~~(,_,"> 4.22/26.73 min .........~~(,_,"> 4.67/27.25 min ..........~~(,_,"> 5.08/27.53 min ...........~~(,_,"> 5.30/26.75 min ...........~~(,_,"> 5.90/27.88 min ............~~(,_,"> 6.17/27.40 min .............~~(,_,"> 6.58/27.60 min ..............~~(,_,"> 6.95/27.58 min ...............~~(,_,"> 7.27/27.37 min ...............~~(,_,"> 7.77/27.85 min ................~~(,_,"> 7.97/27.25 min .................~~(,_,"> 8.47/27.68 min ..................~~(,_,"> 8.70/27.25 min ...................~~(,_,"> 9.12/27.40 min ...................~~(,_,"> 9.62/27.77 min ....................~~(,_,"> 9.88/27.47 min .....................~~(,_,"> 10.33/27.68 min ......................~~(,_,"> 10.68/27.63 min .......................~~(,_,"> 11.02/27.53 min .......................~~(,_,"> 11.37/27.48 min ........................~~(,_,"> 11.88/27.83 min .........................~~(,_,"> 12.12/27.50 min ..........................~~(,_,"> 12.57/27.68 min ...........................~~(,_,"> 13.08/27.98 min ............................~~(,_,"> 13.28/27.62 min ............................~~(,_,"> 13.80/27.92 min .............................~~(,_,"> 14.02/27.60 min ..............................~~(,_,"> 14.53/27.88 min ...............................~~(,_,"> 15.03/28.12 min ................................~~(,_,"> 15.20/27.73 min ................................~~(,_,"> 15.63/27.83 min .................................~~(,_,"> 16.13/28.05 min ..................................~~(,_,"> 16.45/27.95 min ...................................~~(,_,"> 16.87/28.02 min ....................................~~(,_,"> 17.22/27.97 min ....................................~~(,_,"> 17.68/28.12 min .....................................~~(,_,"> 17.85/27.78 min ......................................~~(,_,"> 18.47/28.15 min .......................................~~(,_,"> 18.72/27.97 min ........................................~~(,_,"> 19.17/28.07 min ........................................~~(,_,"> 19.53/28.05 min .........................................~~(,_,"> 19.83/27.93 min ..........................................~~(,_,"> 20.33/28.12 min ...........................................~~(,_,"> 20.62/27.98 min ............................................~~(,_,"> 21.08/28.10 min .............................................~~(,_,"> 21.30/27.88 min .............................................~~(,_,"> 21.83/28.10 min ..............................................~~(,_,"> 22.20/28.08 min ...............................................~~(,_,"> 22.67/28.18 min ................................................~~(,_,"> 23.05/28.20 min .................................................~~(,_,"> 23.38/28.13 min .................................................~~(,_,"> 23.73/28.10 min ..................................................~~(,_,"> 24.17/28.17 min ...................................................~~(,_,"> 24.50/28.12 min ....................................................~~(,_,"> 24.98/28.23 min .....................................................~~(,_,"> 25.35/28.22 min .....................................................~~(,_,"> 25.68/28.17 min ......................................................~~(,_,"> 26.20/28.32 min .......................................................~~(,_,"> 26.40/28.12 min ........................................................~~(,_,"> 26.88/28.23 min .........................................................~~(,_,"> 27.22/28.18 min .........................................................~~(,_,"> 27.57/28.15 min ..........................................................~~(,_,"> 28.07/28.28 min ...........................................................~~(,_,"> 28.57/28.42 min ............................................................~~(,_,"> 28.57/28.57 min ............................................................~~(,_,"> Maximization ... 000/??? sec ~~(,_,"> [oo] 9/ 9 sec ............................................................~~(,_,"> Estimating accuracies in the orientational assignment ... 000/??? sec ~~(,_,"> [oo] 1/ 30 sec ..~~(,_,"> 2/ 30 sec ...~~(,_,"> 3/ 30 sec ......~~(,_,"> 3/ 22 sec .......~~(,_,"> 4/ 24 sec ..........~~(,_,"> 5/ 25 sec ...........~~(,_,"> 6/ 25 sec ..............~~(,_,"> 6/ 22 sec ...............~~(,_,"> 7/ 23 sec ..................~~(,_,"> 8/ 24 sec ...................~~(,_,"> 8/ 21 sec ......................~~(,_,"> 9/ 22 sec .......................~~(,_,"> 9/ 20 sec ..........................~~(,_,"> 10/ 21 sec ...........................~~(,_,"> 10/ 20 sec ..............................~~(,_,"> 11/ 20 sec ...............................~~(,_,"> 11/ 19 sec ..................................~~(,_,"> 12/ 20 sec ....................................~~(,_,"> 12/ 18 sec ......................................~~(,_,"> 13/ 19 sec .......................................~~(,_,"> 13/ 18 sec ..........................................~~(,_,"> 14/ 19 sec ............................................~~(,_,"> 14/ 18 sec ..............................................~~(,_,"> 15/ 18 sec ................................................~~(,_,"> 15/ 18 sec ..................................................~~(,_,"> 16/ 18 sec ....................................................~~(,_,"> 16/ 17 sec ......................................................~~(,_,"> 17/ 18 sec ........................................................~~(,_,"> 17/ 17 sec ..........................................................~~(,_,"> 18/ 18 sec ............................................................~~(,_,"> Auto-refine: Estimated accuracy angles= 0.51 degrees; offsets= 0.39 pixels CurrentResolution= 16.6923 Angstroms, which requires orientationSampling of at least 5.45455 degrees for a particle of diameter 350 Angstroms Oversampling= 0 NrHiddenVariableSamplingPoints= 4374 OrientationalSampling= 7.5 NrOrientations= 18 TranslationalSampling= 2 NrTranslations= 81 ============================= Oversampling= 1 NrHiddenVariableSamplingPoints= 279936 OrientationalSampling= 3.75 NrOrientations= 144 TranslationalSampling= 1 NrTranslations= 648 ============================= Estimated memory for expectation step > 1.94839 Gb, available memory = 24 Gb. Estimated memory for maximization step > 0.0987273 Gb, available memory = 24 Gb. Expectation iteration 10 of 10 000/??? sec ~~(,_,"> [oo] 0.42/18.05 min .~~(,_,"> 0.68/18.70 min ..~~(,_,"> 1.10/22.00 min ...~~(,_,"> 1.48/23.37 min ...~~(,_,"> 1.85/24.05 min ....~~(,_,"> 2.08/23.03 min .....~~(,_,"> 2.60/25.03 min ......~~(,_,"> 3.07/26.13 min .......~~(,_,"> 3.35/25.62 min .......~~(,_,"> 3.78/26.22 min ........~~(,_,"> 4.13/26.20 min .........~~(,_,"> 4.53/26.48 min ..........~~(,_,"> 4.92/26.62 min ...........~~(,_,"> 5.23/26.42 min ...........~~(,_,"> 5.68/26.87 min ............~~(,_,"> 6.13/27.25 min .............~~(,_,"> 6.55/27.47 min ..............~~(,_,"> 6.80/26.98 min ...............~~(,_,"> 7.35/27.68 min ...............~~(,_,"> 7.72/27.67 min ................~~(,_,"> 7.98/27.30 min .................~~(,_,"> 8.45/27.63 min ..................~~(,_,"> 8.77/27.45 min ...................~~(,_,"> 9.28/27.90 min ...................~~(,_,"> 9.60/27.73 min ....................~~(,_,"> 10.02/27.85 min .....................~~(,_,"> 10.45/28.00 min ......................~~(,_,"> 10.70/27.67 min .......................~~(,_,"> 11.22/28.03 min .......................~~(,_,"> 11.50/27.80 min ........................~~(,_,"> 11.90/27.87 min .........................~~(,_,"> 12.27/27.85 min ..........................~~(,_,"> 12.68/27.93 min ...........................~~(,_,"> 13.02/27.85 min ............................~~(,_,"> 13.47/28.00 min ............................~~(,_,"> 13.78/27.88 min .............................~~(,_,"> 14.23/28.03 min ..............................~~(,_,"> 14.77/28.33 min ...............................~~(,_,"> 15.00/28.05 min ................................~~(,_,"> 15.43/28.15 min ................................~~(,_,"> 15.82/28.17 min .................................~~(,_,"> 16.18/28.13 min ..................................~~(,_,"> 16.55/28.12 min ...................................~~(,_,"> 17.03/28.28 min ....................................~~(,_,"> 17.32/28.13 min ....................................~~(,_,"> 17.72/28.17 min .....................................~~(,_,"> 18.08/28.15 min ......................................~~(,_,"> 18.45/28.13 min .......................................~~(,_,"> 18.83/28.13 min ........................................~~(,_,"> 19.12/28.00 min ........................................~~(,_,"> 19.58/28.12 min .........................................~~(,_,"> 19.98/28.15 min ..........................................~~(,_,"> 20.35/28.13 min ...........................................~~(,_,"> 20.83/28.28 min ............................................~~(,_,"> 21.03/28.03 min .............................................~~(,_,"> 21.47/28.12 min .............................................~~(,_,"> 21.87/28.13 min ..............................................~~(,_,"> 22.33/28.25 min ...............................................~~(,_,"> 22.62/28.13 min ................................................~~(,_,"> 23.00/28.13 min .................................................~~(,_,"> 23.45/28.22 min .................................................~~(,_,"> 23.87/28.27 min ..................................................~~(,_,"> 24.17/28.17 min ...................................................~~(,_,"> 24.62/28.25 min ....................................................~~(,_,"> 24.93/28.18 min .....................................................~~(,_,"> 25.42/28.30 min .....................................................~~(,_,"> 25.90/28.40 min ......................................................~~(,_,"> 26.10/28.20 min .......................................................~~(,_,"> 26.58/28.32 min ........................................................~~(,_,"> 26.90/28.25 min .........................................................~~(,_,"> 27.32/28.28 min .........................................................~~(,_,"> 27.82/28.42 min ..........................................................~~(,_,"> 28.07/28.28 min ...........................................................~~(,_,"> 28.77/28.62 min ............................................................~~(,_,"> 28.77/28.77 min ............................................................~~(,_,"> Maximization ... 000/??? sec ~~(,_,"> [oo] 9/ 9 sec ............................................................~~(,_,">