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## S

scale(double) - Method in class no.uib.cipr.matrix.AbstractMatrix
scale(double) - Method in class no.uib.cipr.matrix.AbstractVector
scale(double) - Method in class no.uib.cipr.matrix.DenseVector
scale(double) - Method in class no.uib.cipr.matrix.distributed.DistVector
scale(double) - Method in interface no.uib.cipr.matrix.Matrix
  `A = alpha*A`
scale(double) - Method in class no.uib.cipr.matrix.sparse.SparseVector
scale(double) - Method in interface no.uib.cipr.matrix.Vector
  `x=alpha*x`
scatter(Object[], Object, int) - Method in class no.uib.cipr.matrix.distributed.Communicator
  Sends data from one task to all other tasks in a group.
send(Object, int, int, int) - Method in class no.uib.cipr.matrix.distributed.Communicator
  Sends data[offset:offset+length] to peer
send(Object, int) - Method in class no.uib.cipr.matrix.distributed.Communicator
set(int, int, double) - Method in class no.uib.cipr.matrix.AbstractMatrix
set(Matrix) - Method in class no.uib.cipr.matrix.AbstractMatrix
set(double, Matrix) - Method in class no.uib.cipr.matrix.AbstractMatrix
set(int, double) - Method in class no.uib.cipr.matrix.AbstractVector
set(Vector) - Method in class no.uib.cipr.matrix.AbstractVector
set(double, Vector) - Method in class no.uib.cipr.matrix.AbstractVector
set(int, double) - Method in class no.uib.cipr.matrix.DenseVector
set(Vector) - Method in class no.uib.cipr.matrix.DenseVector
set(double, Vector) - Method in class no.uib.cipr.matrix.DenseVector
set(int, int, double) - Method in class no.uib.cipr.matrix.distributed.DistColMatrix
set(int, int, double) - Method in class no.uib.cipr.matrix.distributed.DistRowMatrix
set(int, double) - Method in class no.uib.cipr.matrix.distributed.DistVector
set(double, Vector) - Method in class no.uib.cipr.matrix.distributed.DistVector
set(int, int, double) - Method in class no.uib.cipr.matrix.LowerSymmBandMatrix
set(int, int, double) - Method in class no.uib.cipr.matrix.LowerSymmDenseMatrix
set(int, int, double) - Method in class no.uib.cipr.matrix.LowerSymmPackMatrix
set(int, int, double) - Method in class no.uib.cipr.matrix.LowerTriangDenseMatrix
set(int, int, double) - Method in class no.uib.cipr.matrix.LowerTriangPackMatrix
set(int, int, double) - Method in interface no.uib.cipr.matrix.Matrix
  `A(row,column) = value`
set(Matrix) - Method in interface no.uib.cipr.matrix.Matrix
  `A=B`.
set(double, Matrix) - Method in interface no.uib.cipr.matrix.Matrix
  `A=alpha*B`.
set(double) - Method in interface no.uib.cipr.matrix.MatrixEntry
  Sets the value at the current index
set(int, int, double) - Method in class no.uib.cipr.matrix.sparse.CompColMatrix
set(int, int, double) - Method in class no.uib.cipr.matrix.sparse.CompDiagMatrix
set(int, int, double) - Method in class no.uib.cipr.matrix.sparse.CompRowMatrix
set(Matrix) - Method in class no.uib.cipr.matrix.sparse.CompRowMatrix
set(int, int, double) - Method in class no.uib.cipr.matrix.sparse.FlexCompColMatrix
set(int, int, double) - Method in class no.uib.cipr.matrix.sparse.FlexCompRowMatrix
set(Matrix) - Method in class no.uib.cipr.matrix.sparse.FlexCompRowMatrix
set(int, double) - Method in class no.uib.cipr.matrix.sparse.SparseVector
set(Vector) - Method in class no.uib.cipr.matrix.sparse.SparseVector
set(int, int, double) - Method in class no.uib.cipr.matrix.SymmTridiagMatrix
set(int, int, double) - Method in class no.uib.cipr.matrix.TridiagMatrix
set(int, int, double) - Method in class no.uib.cipr.matrix.UnitLowerTriangBandMatrix
set(int, int, double) - Method in class no.uib.cipr.matrix.UnitLowerTriangDenseMatrix
set(int, int, double) - Method in class no.uib.cipr.matrix.UnitLowerTriangPackMatrix
set(int, int, double) - Method in class no.uib.cipr.matrix.UnitUpperTriangBandMatrix
set(int, int, double) - Method in class no.uib.cipr.matrix.UnitUpperTriangDenseMatrix
set(int, int, double) - Method in class no.uib.cipr.matrix.UnitUpperTriangPackMatrix
set(int, int, double) - Method in class no.uib.cipr.matrix.UpperSymmBandMatrix
set(int, int, double) - Method in class no.uib.cipr.matrix.UpperSymmDenseMatrix
set(int, int, double) - Method in class no.uib.cipr.matrix.UpperSymmPackMatrix
set(int, int, double) - Method in class no.uib.cipr.matrix.UpperTriangDenseMatrix
set(int, int, double) - Method in class no.uib.cipr.matrix.UpperTriangPackMatrix
set(int, double) - Method in interface no.uib.cipr.matrix.Vector
  `x(index) = value`
set(Vector) - Method in interface no.uib.cipr.matrix.Vector
  `x=y`
set(double, Vector) - Method in interface no.uib.cipr.matrix.Vector
  `x=alpha*y`
set(double) - Method in interface no.uib.cipr.matrix.VectorEntry
  Sets the value at the current index
setAbsoluteTolerance(double) - Method in class no.uib.cipr.matrix.sparse.DefaultIterationMonitor
  Sets the absolute tolerance
setColumn(int, SparseVector) - Method in class no.uib.cipr.matrix.sparse.FlexCompColMatrix
  Sets the given column equal the passed vector
setDivergenceTolerance(double) - Method in class no.uib.cipr.matrix.sparse.DefaultIterationMonitor
  Sets the divergence tolerance
setEigenvalues(double, double) - Method in class no.uib.cipr.matrix.sparse.Chebyshev
  Sets the eigenvalue estimates.
setFirst() - Method in class no.uib.cipr.matrix.sparse.AbstractIterationMonitor
setFirst() - Method in interface no.uib.cipr.matrix.sparse.IterationMonitor
  Resets the iteration
setIterationMonitor(IterationMonitor) - Method in class no.uib.cipr.matrix.sparse.AbstractIterativeSolver
setIterationMonitor(IterationMonitor) - Method in interface no.uib.cipr.matrix.sparse.IterativeSolver
  Sets iteration monitor
setIterationReporter(IterationReporter) - Method in class no.uib.cipr.matrix.sparse.AbstractIterationMonitor
setIterationReporter(IterationReporter) - Method in interface no.uib.cipr.matrix.sparse.IterationMonitor
  Sets new iteration reporter
setMatrix(Matrix) - Method in class no.uib.cipr.matrix.distributed.BlockDiagonalPreconditioner
setMatrix(Matrix) - Method in class no.uib.cipr.matrix.distributed.TwoLevelPreconditioner
setMatrix(Matrix) - Method in class no.uib.cipr.matrix.sparse.AMG
setMatrix(Matrix) - Method in class no.uib.cipr.matrix.sparse.DiagonalPreconditioner
setMatrix(Matrix) - Method in class no.uib.cipr.matrix.sparse.ICC
setMatrix(Matrix) - Method in class no.uib.cipr.matrix.sparse.ILU
setMatrix(Matrix) - Method in class no.uib.cipr.matrix.sparse.ILUT
setMatrix(Matrix) - Method in interface no.uib.cipr.matrix.sparse.Preconditioner
  Sets the operator matrix for the preconditioner.
setMatrix(Matrix) - Method in class no.uib.cipr.matrix.sparse.SSOR
setMatrixNorm(double) - Method in class no.uib.cipr.matrix.sparse.MatrixIterationMonitor
  Sets the norm of the system matrix
setMaxIterations(int) - Method in class no.uib.cipr.matrix.sparse.DefaultIterationMonitor
  Sets maximum number of iterations to permit
setNormType(Vector.Norm) - Method in class no.uib.cipr.matrix.sparse.AbstractIterationMonitor
setNormType(Vector.Norm) - Method in interface no.uib.cipr.matrix.sparse.IterationMonitor
  Sets the vector-norm to calculate with
setOmega(double, double) - Method in class no.uib.cipr.matrix.sparse.SSOR
  Sets the overrelaxation parameters
setPreconditioner(Preconditioner) - Method in class no.uib.cipr.matrix.sparse.AbstractIterativeSolver
setPreconditioner(Preconditioner) - Method in interface no.uib.cipr.matrix.sparse.IterativeSolver
  Sets preconditioner
setPreconditioner(Preconditioner) - Method in class no.uib.cipr.matrix.sparse.QMR
setRelativeTolerance(double) - Method in class no.uib.cipr.matrix.sparse.DefaultIterationMonitor
  Sets the relative tolerance
setRestart(int) - Method in class no.uib.cipr.matrix.sparse.GMRES
  Sets the restart parameter
setRow(int, SparseVector) - Method in class no.uib.cipr.matrix.sparse.FlexCompRowMatrix
  Sets the given row equal the passed vector
setVectorNorm(double) - Method in class no.uib.cipr.matrix.sparse.MatrixIterationMonitor
  Sets the norm of the right hand side vector
size - Variable in class no.uib.cipr.matrix.AbstractVector
  Size of the vector
size() - Method in class no.uib.cipr.matrix.AbstractVector
size() - Method in class no.uib.cipr.matrix.distributed.CollectiveCommunications
  Gets the size of the collective
size() - Method in class no.uib.cipr.matrix.distributed.Communicator
  Size of the collective
size() - Method in class no.uib.cipr.matrix.io.VectorSize
  Returns the size of the vector
size() - Method in interface no.uib.cipr.matrix.Vector
  Size of the vector
solve(Vector, Vector) - Method in class no.uib.cipr.matrix.AbstractMatrix
solve(Matrix, Matrix) - Method in class no.uib.cipr.matrix.AbstractMatrix
solve(DenseMatrix) - Method in class no.uib.cipr.matrix.BandCholesky
  Computes `A\B`, overwriting `B`
solve(DenseMatrix) - Method in class no.uib.cipr.matrix.BandLU
  Computes `A\B`, overwriting `B`
solve(Matrix, Matrix) - Method in class no.uib.cipr.matrix.BandMatrix
solve(Vector, Vector) - Method in class no.uib.cipr.matrix.BandMatrix
solve(DenseMatrix) - Method in class no.uib.cipr.matrix.DenseCholesky
  Solves for `B`, overwriting it on return
solve(DenseMatrix) - Method in class no.uib.cipr.matrix.DenseLU
  Computes `A\B`, overwriting `B`
solve(Matrix, Matrix) - Method in class no.uib.cipr.matrix.DenseMatrix
solve(Vector, Vector) - Method in class no.uib.cipr.matrix.DenseMatrix
solve(Matrix, Matrix) - Method in class no.uib.cipr.matrix.LowerSPDBandMatrix
solve(Matrix, Matrix) - Method in class no.uib.cipr.matrix.LowerSPDDenseMatrix
solve(Matrix, Matrix) - Method in class no.uib.cipr.matrix.LowerSPDPackMatrix
solve(Vector, Vector) - Method in interface no.uib.cipr.matrix.Matrix
  `x = A\b`.
solve(Matrix, Matrix) - Method in interface no.uib.cipr.matrix.Matrix
  `X = A\B`.
solve(DenseMatrix) - Method in class no.uib.cipr.matrix.PackCholesky
  Solves for `B`, overwriting it on return
solve(Matrix, Vector, Vector) - Method in class no.uib.cipr.matrix.sparse.BiCG
solve(Matrix, Vector, Vector) - Method in class no.uib.cipr.matrix.sparse.BiCGstab
solve(Matrix, Vector, Vector) - Method in class no.uib.cipr.matrix.sparse.CG
solve(Matrix, Vector, Vector) - Method in class no.uib.cipr.matrix.sparse.CGS
solve(Matrix, Vector, Vector) - Method in class no.uib.cipr.matrix.sparse.Chebyshev
solve(Matrix, Vector, Vector) - Method in class no.uib.cipr.matrix.sparse.GMRES
solve(Matrix, Vector, Vector) - Method in class no.uib.cipr.matrix.sparse.IR
solve(Matrix, Vector, Vector) - Method in interface no.uib.cipr.matrix.sparse.IterativeSolver
  Solves the given problem, writing result into the vector.
solve(Matrix, Vector, Vector) - Method in class no.uib.cipr.matrix.sparse.QMR
solve(Matrix, Matrix) - Method in class no.uib.cipr.matrix.SPDTridiagMatrix
solve(Matrix, Matrix) - Method in class no.uib.cipr.matrix.SymmTridiagMatrix
solve(Vector, Vector) - Method in class no.uib.cipr.matrix.SymmTridiagMatrix
solve(Matrix, Matrix) - Method in class no.uib.cipr.matrix.TridiagMatrix
solve(Vector, Vector) - Method in class no.uib.cipr.matrix.TridiagMatrix
solve(Matrix, Matrix) - Method in class no.uib.cipr.matrix.UpperSPDBandMatrix
solve(Matrix, Matrix) - Method in class no.uib.cipr.matrix.UpperSPDDenseMatrix
solve(Matrix, Matrix) - Method in class no.uib.cipr.matrix.UpperSPDPackMatrix
SparseVector - Class in no.uib.cipr.matrix.sparse
  Sparse vector
SparseVector(int, int) - Constructor for class no.uib.cipr.matrix.sparse.SparseVector
  Constructor for SparseVector.
SparseVector(Vector, boolean) - Constructor for class no.uib.cipr.matrix.sparse.SparseVector
  Constructor for SparseVector, and copies the contents from the supplied vector.
SparseVector(Vector) - Constructor for class no.uib.cipr.matrix.sparse.SparseVector
  Constructor for SparseVector, and copies the contents from the supplied vector.
SparseVector(int) - Constructor for class no.uib.cipr.matrix.sparse.SparseVector
  Constructor for SparseVector.
SparseVector(int, int[], double[], boolean) - Constructor for class no.uib.cipr.matrix.sparse.SparseVector
  Constructor for SparseVector
SparseVector(int, int[], double[]) - Constructor for class no.uib.cipr.matrix.sparse.SparseVector
  Constructor for SparseVector
SPDTridiagMatrix - Class in no.uib.cipr.matrix
  Symmetrical positive definite tridiagonal matrix.
SPDTridiagMatrix(int) - Constructor for class no.uib.cipr.matrix.SPDTridiagMatrix
  Constructor for SPDTridiagMatrix
SPDTridiagMatrix(Matrix) - Constructor for class no.uib.cipr.matrix.SPDTridiagMatrix
  Constructor for SPDTridiagMatrix
SPDTridiagMatrix(Matrix, boolean) - Constructor for class no.uib.cipr.matrix.SPDTridiagMatrix
  Constructor for SPDTridiagMatrix
SSOR - Class in no.uib.cipr.matrix.sparse
  SSOR preconditioner.
SSOR(CompRowMatrix, boolean, double, double) - Constructor for class no.uib.cipr.matrix.sparse.SSOR
  Constructor for SSOR
SSOR(CompRowMatrix) - Constructor for class no.uib.cipr.matrix.sparse.SSOR
  Constructor for SSOR.
sum() - Static method in class no.uib.cipr.matrix.distributed.Reductions
SVD - Class in no.uib.cipr.matrix
  Computes singular value decompositions
SVD(int, int) - Constructor for class no.uib.cipr.matrix.SVD
  Creates an empty SVD which will compute all singular values and vectors
SVD(int, int, boolean) - Constructor for class no.uib.cipr.matrix.SVD
  Creates an empty SVD
SymmBandEVD - Class in no.uib.cipr.matrix
  Computes eigenvalues of symmetrical, banded matrices
SymmBandEVD(int, boolean) - Constructor for class no.uib.cipr.matrix.SymmBandEVD
  Sets up an eigenvalue decomposition for symmetrical, banded matrices.
SymmBandEVD(int, boolean, boolean) - Constructor for class no.uib.cipr.matrix.SymmBandEVD
  Sets up an eigenvalue decomposition for symmetrical, banded matrices
SymmDenseEVD - Class in no.uib.cipr.matrix
  Computes eigenvalues of symmetrical, dense matrices
SymmDenseEVD(int, boolean) - Constructor for class no.uib.cipr.matrix.SymmDenseEVD
  Sets up an eigenvalue decomposition for symmetrical, dense matrices.
SymmDenseEVD(int, boolean, double) - Constructor for class no.uib.cipr.matrix.SymmDenseEVD
  Sets up an eigenvalue decomposition for symmetrical, dense matrices.
SymmDenseEVD(int, boolean, boolean) - Constructor for class no.uib.cipr.matrix.SymmDenseEVD
  Sets up an eigenvalue decomposition for symmetrical, dense matrices.
SymmDenseEVD(int, boolean, boolean, double) - Constructor for class no.uib.cipr.matrix.SymmDenseEVD
  Sets up an eigenvalue decomposition for symmetrical, dense matrices
SymmPackEVD - Class in no.uib.cipr.matrix
  Computes eigenvalues of symmetrical, packed matrices
SymmPackEVD(int, boolean) - Constructor for class no.uib.cipr.matrix.SymmPackEVD
  Sets up an eigenvalue decomposition for symmetrical, packed matrices.
SymmPackEVD(int, boolean, boolean) - Constructor for class no.uib.cipr.matrix.SymmPackEVD
  Sets up an eigenvalue decomposition for symmetrical, packed matrices
SymmTridiagEVD - Class in no.uib.cipr.matrix
  Computes eigenvalues of symmetrical, tridiagonal matrices
SymmTridiagEVD(int) - Constructor for class no.uib.cipr.matrix.SymmTridiagEVD
  Sets up an eigenvalue decomposition for symmetrical, tridiagonal matrices.
SymmTridiagEVD(int, double) - Constructor for class no.uib.cipr.matrix.SymmTridiagEVD
  Sets up an eigenvalue decomposition for symmetrical, tridiagonal matrices.
SymmTridiagEVD(int, boolean) - Constructor for class no.uib.cipr.matrix.SymmTridiagEVD
  Sets up an eigenvalue decomposition for symmetrical, tridiagonal matrices.
SymmTridiagEVD(int, boolean, double) - Constructor for class no.uib.cipr.matrix.SymmTridiagEVD
  Sets up an eigenvalue decomposition for symmetrical, tridiagonal matrices
SymmTridiagMatrix - Class in no.uib.cipr.matrix
  Symmetrical tridiagonal matrix.
SymmTridiagMatrix(double[], double[], int) - Constructor for class no.uib.cipr.matrix.SymmTridiagMatrix
  Constructor for SymmTridiagMatrix
SymmTridiagMatrix(double[], double[]) - Constructor for class no.uib.cipr.matrix.SymmTridiagMatrix
  Constructor for SymmTridiagMatrix
SymmTridiagMatrix(int) - Constructor for class no.uib.cipr.matrix.SymmTridiagMatrix
  Constructor for SymmTridiagMatrix
SymmTridiagMatrix(Matrix) - Constructor for class no.uib.cipr.matrix.SymmTridiagMatrix
  Constructor for SymmTridiagMatrix
SymmTridiagMatrix(Matrix, boolean) - Constructor for class no.uib.cipr.matrix.SymmTridiagMatrix
  Constructor for SymmTridiagMatrix
synchronizedMatrix(Matrix) - Static method in class no.uib.cipr.matrix.Matrices
  Returns a synchronized matrix which wraps the given matrix.
synchronizedMatrixByColumns(Matrix) - Static method in class no.uib.cipr.matrix.Matrices
  Returns a synchronized matrix which wraps the given matrix.
synchronizedMatrixByRows(Matrix) - Static method in class no.uib.cipr.matrix.Matrices
  Returns a synchronized matrix which wraps the given matrix.
synchronizedVector(Vector) - Static method in class no.uib.cipr.matrix.Matrices
  Returns a synchronized vector which wraps the given vector.

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