| Class | Description |
|---|---|
| CIPChirality |
A fully validated relatively efficient implementation of Cahn-Ingold-Prelog
rules for assigning R/S, M/P, and E/Z stereochemical descriptors.
|
| CIPData |
A helper class to handle application-specific analysis and store
information needed by CIPChirality and CIPDataSmiles.
|
| CIPDataSmiles |
A subclass that allows Jmol processing of SMILES using
"...smiles...".find("SMILES","chirality")
|
| CIPDataTracker |
An optional class to track digraph paths to decisions.
|
| HallInfo | |
| HallRotation | |
| HallRotationTerm | |
| HallTranslation | |
| PointGroup | |
| SpaceGroup | |
| Symmetry | |
| SymmetryDesc |
A class to handle requests for information about space groups and symmetry
operations.
|
| SymmetryInfo | |
| SymmetryOperation | |
| UnitCell |
a class private to the org.jmol.symmetry package
to be accessed only through the SymmetryInterface API
adds vertices and offsets orientation,
and a variety of additional calculations that in
principle could be put in SimpleUnitCell
if desired, but for now are in this optional package.
|
| UnitCellIterator |